Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03285 ATGGAAAGTGATGATACTGAAGAAAAATTAGTCTCCACCACTTCAAACTCCTCAAATTCAAGCACCATTAAAGAAAGAATGTCATCAAGAAGAGCATGTCAAATGTCCAAAAACGGCAACGAGTGCAAGAAAATGGAGAACAACAATGGCGACTACTATGCAGGGATGCATCACCCAACATACAGAGGTGTGAGAATGAGGGCATGGGGTAAGTGGGTGTCTGAGATCCGGGAGCCAAGAAAGAAATCAAGAATTTGGCTGGGAACATATAGAACCGCTGAAATGGCGGCAAAAGCGCATGACGTGGCGGCTTTAGCCATCAAAGGCCCTTCGGCTTACCTCAATTTCCCTAAAATGGCTCGGCGTTACCCAAGGCCAGTCAGTACATCTCCTAAGGACATTCAAGCTGCGGCCTCCAAGGCGGCAGCCGTGGAGAACAATACTGAAGCTGATGCTGAAGAAGAAGAACAAAATCTTGGCCTAATAATGGAATCTTCAACTTCCACTAATAATAATAATGAGCAAGAATCTTCAAGTATGGATGATGATGATGATGGCGCATTGTTTGACCTGCTACCGGATCTTTTCTCCGACGATGGAAAGAGCAGTGCATCTTCTTCCTCTTATTCTCCTTCTTGGCATCTACTATTTGCAGTTGATTATGGATTCAGGCTTGAGGAGCATTTTTTGTGGGAGAATTACTAG 705 0.444 MESDDTEEKLVSTTSNSSNSSTIKERMSSRRACQMSKNGNECKKMENNNGDYYAGMHHPTYRGVRMRAWGKWVSEIREPRKKSRIWLGTYRTAEMAAKAHDVAALAIKGPSAYLNFPKMARRYPRPVSTSPKDIQAAASKAAAVENNTEADAEEEEQNLGLIMESSTSTNNNNEQESSSMDDDDDGALFDLLPDLFSDDGKSSASSSSYSPSWHLLFAVDYGFRLEEHFLWENY 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03285 234 SUPERFAMILY DNA-binding domain 60 117 IPR016177 GO:0003677
Arst6g03285 234 Gene3D AP2/ERF domain 60 119 IPR036955 GO:0003700|GO:0006355
Arst6g03285 234 Pfam AP2 domain 59 109 IPR001471 GO:0003700|GO:0006355
Arst6g03285 234 CDD AP2 61 117 IPR001471 GO:0003700|GO:0006355
Arst6g03285 234 SMART rav1_2 60 123 IPR001471 GO:0003700|GO:0006355
Arst6g03285 234 ProSiteProfiles AP2/ERF domain profile. 60 117 IPR001471 GO:0003700|GO:0006355
Arst6g03285 234 MobiDBLite consensus disorder prediction 1 41 - -
Arst6g03285 234 FunFam Ethylene-responsive transcription factor 2 59 118 - -
Arst6g03285 234 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Arst6g03285 234 PRINTS Ethylene responsive element binding protein signature 83 99 IPR001471 GO:0003700|GO:0006355
Arst6g03285 234 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 17 199 - -
Arst6g03285 234 MobiDBLite consensus disorder prediction 10 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03285 Arst-Chr6 100137329 100138302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03285 43 230 AP2-EREBP Transcription Factor Family AT2G44940 50.704 3.27e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Arst6g03285 AP2 9.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03285 - - gmx:100801129 191.045