Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03260 ATGGAATCACAAGAGACATCTTCAATAGGAGCAGAAGCACTTCTACATATGTCTCCTGGATCAGCGGTTTCTGTTGCATACCACCCTCTGTTTGGACCGCATGATGATCTGATCGTTCTAGAGCTTGATGATAAACTTCTTCCCGATGTTCTGCATGAAAGGTGTGTATTGAATTCTCAGCTTTTTGTAGTTCTTTGTACTCAATCCAAAACATTTGCAATGAAGTTCGTTGGAACTTCAAATTCTGTTTTGCTTATACCTCCTGCAAATCAATATGTTTTTGATCAAAATCCACAAAATGGTGCAAATAATCACAAGGAGAAAGTTGTTGCACCTGTGATTAAAGTTGTACCTGGTAATATGGAGCTTGTTGAGGTTGCCCCCAGACTTGACAAACTTAAATTGCTCCTCTCGCAGAACCCTTGCAGGCTTGAAGAGTTTGACAGTTCAGAAGTGAATCCAGAAACTAGAGCAGGGTTATATAACTGGAAGGATCTTAAAAACAATATTCAAGCTAGTGACGAGGAACTAAGATCCGGACTGCAGGCACTATCGGCTGTGGAGATTAATAGCTATTGGAGACTAGTAGACGAGAGATACATGAACATGATTCTGGAAATGGTTTTGAGAAATGCAGTGTTGAACGACTGGTCACTGAGTGCTCTTAATGAAGATGAAGTCGTAAGCATGCTGGTTACCGATGGATTTCCTGCAGAACTTGCAAGGCATTGCTTGCACGTATATGGTGAGAAAGTAATTGACGGCACGGATACCTGTGCATGGAAGTTAGACAAGAAGCGGGTTTGCATTCATTTTGCGAGAGAAATCCTGAGAGGGGGCAAGATGAAGCTGGAGAGTTTTATGGATGAGTGGAGGCAGAGGACTCCAGATGAAATGCAGCCAACTTTTGATCTTGTCGAAGGAGAAGTTTTGACAGAGAGAATTGGAGTCGAGACATGGGTCCGTGGATTCAGCGTCTCTTCGTTGCCATCCACTCCGGCTGAACGATTCTCGATTCTTTTCAAAGAGCGGCCAAAATGGGAATGGAAAGATCTGCAGCCTTATATTAGGGATCTGAATGTGCCAGGTCTTACTTCTGAAGGTTTGCTATTGAAATACACTCGCAGAACACAACCATCACCTGAAATAGAACCAATTTTCAGTGCAAGATAG 1173 0.4271 MESQETSSIGAEALLHMSPGSAVSVAYHPLFGPHDDLIVLELDDKLLPDVLHERCVLNSQLFVVLCTQSKTFAMKFVGTSNSVLLIPPANQYVFDQNPQNGANNHKEKVVAPVIKVVPGNMELVEVAPRLDKLKLLLSQNPCRLEEFDSSEVNPETRAGLYNWKDLKNNIQASDEELRSGLQALSAVEINSYWRLVDERYMNMILEMVLRNAVLNDWSLSALNEDEVVSMLVTDGFPAELARHCLHVYGEKVIDGTDTCAWKLDKKRVCIHFAREILRGGKMKLESFMDEWRQRTPDEMQPTFDLVEGEVLTERIGVETWVRGFSVSSLPSTPAERFSILFKERPKWEWKDLQPYIRDLNVPGLTSEGLLLKYTRRTQPSPEIEPIFSAR 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03260 390 Pfam Sister chromatid cohesion protein Dcc1 39 356 IPR019128 GO:0007064|GO:0031390
Arst6g03260 390 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 10 390 IPR019128 GO:0007064|GO:0031390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03260 Arst-Chr6 99782417 99786571 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03260 10 390 C3H Transcription Factor Family AT2G44580 53.964 5.64e-151 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03260 K11271 - gmx:100817511 575.089