Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03258 ATGTCAATTCTCTCTCTGGTGATATCCCTCGTCAGATTGCCAACCTCTCTAATCTTCAAGGCAGTTTTGCAGATTAGCTATAACGAGTTCAGTGGCGGTGTACCTTCTGAACTAGAGAAGTTGAAGAAGCTTAGCGTTCTTTCACTGCAATATAATCAATTATACGGCGCAATTCCAGCAAGTTTGGGTGAATTGGACTCGCTAACACGATTAGATCTGAGCTTCAACCAATTTTTCGGTCCAATCCCAGTGAGTTTGGGTTATGCACCCAAACTGCAGATTCTAGATGTTCGAAACAATTCTCTCTCGGGGAATATCCCTAAAGCACTAGAAAGACTTAAAGGTGGATTCCAGTACATGAACAATCCTGGTTTATGTGGAACCGGATTCGCTGATTTATCTCCTTGTAGAGCAGTAATCAGTTCAGACCCGGTCAGACCGGAACCATATGAGCCTGGTAATCTTTCTTCAGAAGTTCTTCCAACGACGGTTCAACCAAAAGATATAAAGCCATCAAAACCATCGAATATCGGTTTGGTTTTCGCGGTAATTGCAGTTACTTTTGCTTCAACCATCTTTGGCCTGTTTATAGTGCTATGGTATCGGCATCAGAAATTGAAAATTGGAAGCACTGCTAACACTACTAGCAAGATGAAGGAAGCACGCAGGAAAATTTCATCTCCTCTGATAAGTTTGGAGTACTCCAATGGATGGGATCCATTAGCCAAAGGTCAAAGTGGTTATTCCCAGGAATTCCTAGAGAGCTTAATGTTCAACGTTGAAGATGTGGAACGCGCAACTCAGTGTTTCTCAGAGCTAAATTTGTTGGGGAAGGGTGAGTTTTCTACTATATACAGGGGAATACTGAGAGATGGATCTGTTGTGGTAGTAAAGTGCATTGCGAAAACAAGCTGCAAGCCTGATGAAACAGAGTTCTTGAAAGGGTTGAAGATATTGACTTCACTGAGGCATGAAAATCTGGTTCGGTTGAGAGGCTTTTGCTGTTCCAAGAGCCGTGGGGAGTGTTTTCTGGTCTATGATTTTGTCTCGAATGGGAGTTTGTTACGGTGCCTTGACGATGCTAAAGTTATTGAATGGTCCACAAGAGTATCCATCATCCATGGCATTGCTAAAGGTATTGCTTATCTGCATGGAAAGAAGGGAAGCAAAGGCGGTCTACTTCACCAGAATTTATCAGCCGATACAGTGCTTCTAGATGCCCGGTACAATGCGGTTCTTGCATATTCGGGATTGCACAAGCTGCTGGCAGACGACGTCGTCTTTTCCACCCTCAAAGCTAGTGCAGCCATGGGATATCTGTCTCCGGAATACACGAAAACAGGTCGTCTAACCGAGAAGAGTGATGTGTATGCATTTGGAGTGATTGTTTTCCAGCTTCTTAGTGGTAAACGTGACATCACTCAGTTAAGTCGCCAGGCGGTACAAGTTGATGACAAACTTGAAGGGAAGTTCTCGGAATCAGAGGCCGTGAAACTCTGGGGAGTTGCTCTGCTTTGCACCCACGAATCTCCTCATCTCCGACCATATATGGAAGATGTGATTCAAGAACTCTGTGACTAA 1581 0.4396 MSILSLVISLVRLPTSLIFKAVLQISYNEFSGGVPSELEKLKKLSVLSLQYNQLYGAIPASLGELDSLTRLDLSFNQFFGPIPVSLGYAPKLQILDVRNNSLSGNIPKALERLKGGFQYMNNPGLCGTGFADLSPCRAVISSDPVRPEPYEPGNLSSEVLPTTVQPKDIKPSKPSNIGLVFAVIAVTFASTIFGLFIVLWYRHQKLKIGSTANTTSKMKEARRKISSPLISLEYSNGWDPLAKGQSGYSQEFLESLMFNVEDVERATQCFSELNLLGKGEFSTIYRGILRDGSVVVVKCIAKTSCKPDETEFLKGLKILTSLRHENLVRLRGFCCSKSRGECFLVYDFVSNGSLLRCLDDAKVIEWSTRVSIIHGIAKGIAYLHGKKGSKGGLLHQNLSADTVLLDARYNAVLAYSGLHKLLADDVVFSTLKASAAMGYLSPEYTKTGRLTEKSDVYAFGVIVFQLLSGKRDITQLSRQAVQVDDKLEGKFSESEAVKLWGVALLCTHESPHLRPYMEDVIQELCD 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03258 526 SUPERFAMILY Protein kinase-like (PK-like) 247 524 IPR011009 -
Arst6g03258 526 ProSiteProfiles Protein kinase domain profile. 270 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03258 526 Pfam Protein tyrosine and serine/threonine kinase 274 524 IPR001245 GO:0004672|GO:0006468
Arst6g03258 526 FunFam Piriformospora indica-insensitive protein 2 34 118 - -
Arst6g03258 526 Gene3D Ribonuclease Inhibitor 7 138 IPR032675 -
Arst6g03258 526 Gene3D Transferase(Phosphotransferase) domain 1 350 526 - -
Arst6g03258 526 ProSitePatterns Protein kinases ATP-binding region signature. 276 302 IPR017441 GO:0005524
Arst6g03258 526 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 19 114 - -
Arst6g03258 526 Pfam Leucine Rich Repeat 91 113 IPR001611 GO:0005515
Arst6g03258 526 FunFam Protein NSP-INTERACTING KINASE 2 242 348 - -
Arst6g03258 526 Gene3D Phosphorylase Kinase; domain 1 242 348 - -
Arst6g03258 526 SUPERFAMILY L domain-like 22 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03258 Arst-Chr6 99767686 99770870 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03258 22 379 Miscellaneous Gene Families AT4G22730 43.445 7.61e-101 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Arst6g03258 PK_Tyr_Ser-Thr 4.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03258 - - vun:114183221 679.478