Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03257 ATGTCTCTGCTTCTCCAAGTGTTCCTCCTCCTGATATGTGCTTCGCCATCTCTCCCCGCCAAGACCACAGAGCTTGAAGCTCTCATGACCATCAAACAATCTCTTGACCCACAAAACCGTGTGCTGACTTCGTGGACCCCACACTCCGACCCATGTAGCAGTTTCCCTGGTCATTTTGAGGGCGTGGCTTGCAACCAACAAGGTCTTGTAGTGAATATCTCACTGCAAGGAAAGGGTCTCTCTGGAAGCATACCTGCCGCCATTTCTAGTCTTAAGAGCTTGACTGGTCTCTATCTTCACTTCAACTCTCTCACTGGAATTTTACCCAAGGAGATTTCCTCCTTGACTCACCTCACTGACTTGTATCTCAATGTCAATTCTCTCTCTGGTGATATCCCTCGTCAGATTGCCAACCTCTCTAATCTTCAAGTTTTGCAGATTAGCTATAACGAGTTCAGTGGCGGTGTACCTTCTGAACTAGAGAAGTTGAAGAAGCTTAGCGTTCTTTCACTGCAATATAATCAATTATACGGCGCAATTCCAGCAAGTTTGGGTGAATTGGACTCGCTAACACGATTAGATCTGAGCTTCAACCAATTTTTCGGTCCAATCCCAGTGAGTTTGGGTTATGCACCCAAACTGCAGATTCTAGATGTTCGAAACAATTCTCTCTCGGGGAATATCCCTAAAGCACTAGAAAGACTTAAAGGTGGATTCCAGTACATGAACAATCCTGGTTTATGTGGAACCGGATTCGCTGATTTATCTCCTTGTAGAGCAGTAATCAGTTCAGACCCGGTCAGACCGGAACCATATGAGCCTGGTAATCTTTCTTCAGAAGTTCTTCCAACGACGGTTCAACCAAAAGATATAAAGCCATCAAAACCATCGAATATCGGTTTGGTTTTCGCGGTAATTGCAGTTACTTTTGCTTCAACCATCTTTGGCCTGTTTATAGTGCTATGGTATCGGCATCAGAAATTGAAAATTGGAAGCACTGCTAACACTACTAGCAAGATGAAGGAAGCACGCAGGAAAATTTCATCTCCTCTGATAAGTTTGGAGTACTCCAATGGATGGGATCCATTAGCCAAAGGTCAAAGTGGTTATTCCCAGGAATTCCTAGAGAGCTTAATGTTCAACGTTGAAGATGTGGAACGCGCAACTCAGTGTTTCTCAGAGCTAAATTTGTTGGGGAAGGGTGAGTTTTCTACTATATACAGGGGAATACTGAGAGATGGATCTGTTGTGGTAGTAAAGTGCATTGCGAAAACAAGCTGCAAGCCTGATGAAACAGAGTTCTTGAAAGGGTTGAAGATATTGACTTCACTGAGGCATGAAAATCTGGTTCGGTTGAGAGGCTTTTGCTGTTCCAAGAGCCGTGGGGAGTGTTTTCTGGTCTATGATTTTGTCTCGAATGGGAGTTTGTTACGGTGCCTTGACGATGCTAAAGTTATTGAATGGTCCACAAGAGTATCCATCATCCATGGCATTGCTAAAGGTATTGCTTATCTGCATGGAAAGAAGGGAAGCAAAGGCGGTCTACTTCACCAGAATTTATCAGCCGATACAGTGCTTCTAGATGCCCGGTACAATGCGGTTCTTGCATATTCGGGATTGCACAAGCTGCTGGCAGACGACGTCGTCTTTTCCACCCTCAAAGCTAGTGCAGCCATGGGATATCTGTCTCCGGAATACACGAAAACAGGTCGTCTAACCGAGAAGAGTGATGTGTATGCATTTGGAGTGATTGTTTTCCAGCTTCTTAGTGGTAAACGTGACATCACTCAGTTAAGTCGCCAGGCGGTACAAGTTGATGACAAACTTGAAGGGAAGTTCTCGGAATCAGAGGCCGTGAAACTCTGGGGAGTTGCTCTGCTTTGCACCCACGAATCTCCTCATCTCCGACCATATATGGAAGATGTGATTCAAGAACTCTGTGACTAA 1947 0.4484 MSLLLQVFLLLICASPSLPAKTTELEALMTIKQSLDPQNRVLTSWTPHSDPCSSFPGHFEGVACNQQGLVVNISLQGKGLSGSIPAAISSLKSLTGLYLHFNSLTGILPKEISSLTHLTDLYLNVNSLSGDIPRQIANLSNLQVLQISYNEFSGGVPSELEKLKKLSVLSLQYNQLYGAIPASLGELDSLTRLDLSFNQFFGPIPVSLGYAPKLQILDVRNNSLSGNIPKALERLKGGFQYMNNPGLCGTGFADLSPCRAVISSDPVRPEPYEPGNLSSEVLPTTVQPKDIKPSKPSNIGLVFAVIAVTFASTIFGLFIVLWYRHQKLKIGSTANTTSKMKEARRKISSPLISLEYSNGWDPLAKGQSGYSQEFLESLMFNVEDVERATQCFSELNLLGKGEFSTIYRGILRDGSVVVVKCIAKTSCKPDETEFLKGLKILTSLRHENLVRLRGFCCSKSRGECFLVYDFVSNGSLLRCLDDAKVIEWSTRVSIIHGIAKGIAYLHGKKGSKGGLLHQNLSADTVLLDARYNAVLAYSGLHKLLADDVVFSTLKASAAMGYLSPEYTKTGRLTEKSDVYAFGVIVFQLLSGKRDITQLSRQAVQVDDKLEGKFSESEAVKLWGVALLCTHESPHLRPYMEDVIQELCD 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03257 648 SUPERFAMILY Protein kinase-like (PK-like) 369 646 IPR011009 -
Arst6g03257 648 Pfam Leucine Rich Repeat 213 235 IPR001611 GO:0005515
Arst6g03257 648 SUPERFAMILY L domain-like 22 236 - -
Arst6g03257 648 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 140 646 IPR046959 -
Arst6g03257 648 FunFam Protein NSP-INTERACTING KINASE 2 21 173 - -
Arst6g03257 648 Pfam Leucine rich repeat N-terminal domain 23 65 IPR013210 -
Arst6g03257 648 Gene3D Ribonuclease Inhibitor 21 172 IPR032675 -
Arst6g03257 648 ProSiteProfiles Protein kinase domain profile. 392 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03257 648 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Arst6g03257 648 Gene3D Transferase(Phosphotransferase) domain 1 472 648 - -
Arst6g03257 648 Pfam Protein tyrosine and serine/threonine kinase 396 646 IPR001245 GO:0004672|GO:0006468
Arst6g03257 648 Gene3D Phosphorylase Kinase; domain 1 364 470 - -
Arst6g03257 648 ProSitePatterns Protein kinases ATP-binding region signature. 398 424 IPR017441 GO:0005524
Arst6g03257 648 Gene3D Ribonuclease Inhibitor 173 246 IPR032675 -
Arst6g03257 648 FunFam Protein NSP-INTERACTING KINASE 2 364 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03257 Arst-Chr6 99767201 99770870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03257 3 501 Miscellaneous Gene Families AT4G22730 46.226 2.08e-155 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Arst6g03257 PK_Tyr_Ser-Thr 6.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03257 - - vun:114183221 867.84