Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03236 ATGAGGAAAGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGGTGGAGGAATATGAGGTATCTTGATCTAGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGTTTAGGATAAAGCTTGACTATGGCTGCGGTATATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGACACCACTCCAATTTGCGCATCTGGTTCCGGCCAATTGTCGTCTCATTGTCACTGATAAAGTCCAAGTGAAAAATCTTCATAATTTTGGTGTCAAGACCTGCCATATTATGGGGTATATTGCGTTCCAGAAGGGTGGATATCGTCATGCTGGCTTCACACGCAAAGATTTGTACAACCACATTGATCGTTATCGTCAGTCGAAAGTTAAAAACGGGGATGTCAATGCGGCAATAAACTATTTGATTGATGGGCAGTCAATTATCAACTATCACTGTTTTGGAGATATTGTTGCCTTTGATTTAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCCGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCTCCGGCCTACTATCCGACGAAACCACAGAGACGTATAAGTGGTTGTTGGAAACTTTTGTTGAAGCGATGGGTGGGAAAAGTCCTAAAGCTGTAATAACTGACGGAGACCTTGCCATGCAAGATGCAATCAAGAATGTTCTTCCTGATGCGACCCATCGGTTATGCGGATGGCATCTGCAAAGAAATGCATGTGAAAATATAAAGAATCCTAATTTCCTGCGCGATTTTAAGTGTCTTATATATGACAACACCGACCAGAGAGACTTTGATCGGAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTAGGAGTACCTGGATGGAAAAGACGTACGAAACTCGTGCGATGTGGTCCCATTGTTTCCTCCGGGATAAGTTTTTCGGTTACATAAGGACGACATCACAGTGCGAAGGTATAAATTCTCTCATCAGATTTTATGTTAATCGCAAGAACACCCACATTGACTTCATGCATAACCTGGATAGGGCCTTAAAAGAGTATAGAAACAACGAATTAATAGCTGACTTTAAGTCTCAGTTCTTAGAGCCAGTGATGATTACCTCGTTGGAGGTATATGAAAGATTTGCATCATGTTATTTCACGCGAAACATTTTCAAGGAAATTCGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATCAAGGTACTAAGCACAACCTTGGACAAGGTCGAGTTCAGTGTGACTGCTCTTGGAGACCCGGCCAAAGATCGACGGGTGGAAGTCGATAGAGGTAAGAATCTGTTCTCGTGCTCGTGCAAGCTGTTTGAATCACGTGGTATTCCATGTAGTCATGTCTTCTGTGCCATGAAGTTCGAAAACATACTTGAGTTTCCAGATTCGTTGATCTAA 1488 0.4274 MRKDDVVRDNQGRIISRQLVCNKEGWRNMRYLDLDDRSREARSLTRTKCPARFRIKLDYGCGIWKVSCFVESHNHDLTPLQFAHLVPANCRLIVTDKVQVKNLHNFGVKTCHIMGYIAFQKGGYRHAGFTRKDLYNHIDRYRQSKVKNGDVNAAINYLIDGQSIINYHCFGDIVAFDLTYKKNKYNKPLVIFSGCNHHGQTVIFGSGLLSDETTETYKWLLETFVEAMGGKSPKAVITDGDLAMQDAIKNVLPDATHRLCGWHLQRNACENIKNPNFLRDFKCLIYDNTDQRDFDRRWAAILDKHNLVRSTWMEKTYETRAMWSHCFLRDKFFGYIRTTSQCEGINSLIRFYVNRKNTHIDFMHNLDRALKEYRNNELIADFKSQFLEPVMITSLEVYERFASCYFTRNIFKEIRNEIQRAGALNIKVLSTTLDKVEFSVTALGDPAKDRRVEVDRGKNLFSCSCKLFESRGIPCSHVFCAMKFENILEFPDSLI 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03236 495 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 7 494 IPR031052 GO:0006355
Arst6g03236 495 ProSiteProfiles Zinc finger SWIM-type profile. 450 486 IPR007527 GO:0008270
Arst6g03236 495 Pfam MULE transposase domain 173 267 IPR018289 -
Arst6g03236 495 Pfam FAR1 DNA-binding domain 8 78 IPR004330 -
Arst6g03236 495 SMART 26again6 461 488 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03236 Arst-Chr6 99425281 99426848 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst6g03236 MULE 5.4e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03236 - - ahf:112755379 944.88