Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03231 ATGTATAGAATAATTTCGACGCCGGCGTCAAAGTTCCGCCAGTTCGGGCGACTCCGATCAAGAACTAGAAACACCGCCAACTCTGACGAGGAGAACGCATTCCAGATCCTATGGCGCTACCAGATCCTAGACCCGGACAGCGACATAGTTGCGTATTGGAACAGGGTGTTCCTCGTGGCAAGTCTCCTCGCTCTCTTCGTGGACCCTCTTTACTTCTTCCTCCCCACGGTGGGTGGCACCGCTTGCCTCAAGGCGGACCCCAGACTCAGCATCATCGTCACCATTATGCGAACCTTTGCCGATCTCTTCTACATCCTCCACATGGTCTTGAAGTTCCGCACCGCCTTCGTCGCCCCCAATTCTAGAGTCTTCGGCCGCGGTGACCTTGTCATGGACCCTCACGAAATCGCCATGCGCTACTTGAAGTCCGATTTTGTAATCGACCTTGCCGCCACTATTCCTCTGCCCCAGATTGTGATTTGGTTGGTGATTCCAGCAAGTAGTTCTTCAACAACGGATCATGCCAACAACACTCTTGCACTCTTTGTTCTAATTCAGTATATTCCCAGGCTCTTTCTTATCTTCCCTTTGAACCAGCGTATCACGAAAACCACTGGCGTTATTGCCAAAACCCCCTGGATTGCAGCCGCATACAATCTTCTTCTCTACATGCTAGCTAGTCATATTACAGGAGCAACGTGGTATCTGTCCTCAATTGGGAGACAATTCAACTGCTGGAAAGCAGAGTGCGAAAGAGAGAATAGATCAAAAACCATAACTTGCTTGCCTACTTTTCTTGATTGTAACAGTGTGAGTTTACCTGCAAGGCAACACTGGCTAAATGTCACTCAAGTTATTAACAGATGCGATCCCAAGGCCAAGCTCAACGTCAAGTATAAGTTTGGCATGTTTGCAGATGCTTTTCTCAATGATGTTGTTACTACTAACTTTGTGGAAAGATACTTCTATTGTCTTTGGTGGGGATTAAGAAATTTAAGCTCGTATGGACAGAATTTGGACACAACCACATACCTCCCAGAGACATTTTTCTGCATCTTCTTATGTCTTGCTGGATTAATTCTCTTTTGTCTTTTGATTGGAAACATGCAGACATACTTGCAATCAATGTCAGTTAGACTTGAAGAATGGAGGATTAGGAAGAATGACACTGAGCAATGGATGAGACATCGCCAATTGCCTCCAGACTTGCAGGAACGCGTTCGTCGCTTTGTTCAGTATAAATGGCTTGCCACCAGAGGAGTGAATGAAGAGTCCATACTACTTGATCTACCTTTGGATCTCCGCCGTGAAATTCAACACCACTTGTGCCTTTCTCTTGTTCGACGTGTCCCTTTCTTCTCACAAATGGATGACCAGCTCCTTGATGCAATCTGTGAACGGCTGGTGTCATCATTAAGCACAGAAGGCACATATATATTCCGAGAGGGAGATCCGGTGGACGAAATGTTGTTCATAATAAGAGGACAATTGGAGAGCTCCACAACCAATGGAGGAAGGTCTGGTTTCTACAATTCCATCACACTTAGGCCTGGCGACTTTTGCGGTGAGGAGCTTTTGACATGGGCCTTAATGCCAAATTCCACCCTCAACCTGCCTTCCTCTACTCGAACTGTAAAAGCTTTATCAGAAGTCGAAGCTTTCGCGTTGGAAGCAGAGGATCTAAAGTTCGTGGCAAGTCAATTCAAGCGGCTTCATAGCAAGAAACTCCAGCACGCGTTTAGGTACTACTCCCAGCAATGGAGGACATGGGCTTCTTGTTTCATACAGGCGGCATGGCGAAAGTATCAGAAGAGGAAAGCGGCGAGGGAGTTGTCTTTGAAGGAGGGACACTTTTACATGTCTCTCCCTGAGAAGGACAGAGAAATGGATCAAAGTGGAGGATCATCATCATCTCCAGGGAATGTGAGAAAGGTTCAGAACATTAGTACAACCATTTTGGCTTCAAGGTTTGCGGCTAATACAAGGAAAGCTAAGCTTCGTGGCAGTGATCCTGTGCCACAGTTGTTCAAGCCTGATGAACCTGACTTCTCTGTAGATCGTGAGGAAGTTTAG 2073 0.466 MYRIISTPASKFRQFGRLRSRTRNTANSDEENAFQILWRYQILDPDSDIVAYWNRVFLVASLLALFVDPLYFFLPTVGGTACLKADPRLSIIVTIMRTFADLFYILHMVLKFRTAFVAPNSRVFGRGDLVMDPHEIAMRYLKSDFVIDLAATIPLPQIVIWLVIPASSSSTTDHANNTLALFVLIQYIPRLFLIFPLNQRITKTTGVIAKTPWIAAAYNLLLYMLASHITGATWYLSSIGRQFNCWKAECERENRSKTITCLPTFLDCNSVSLPARQHWLNVTQVINRCDPKAKLNVKYKFGMFADAFLNDVVTTNFVERYFYCLWWGLRNLSSYGQNLDTTTYLPETFFCIFLCLAGLILFCLLIGNMQTYLQSMSVRLEEWRIRKNDTEQWMRHRQLPPDLQERVRRFVQYKWLATRGVNEESILLDLPLDLRREIQHHLCLSLVRRVPFFSQMDDQLLDAICERLVSSLSTEGTYIFREGDPVDEMLFIIRGQLESSTTNGGRSGFYNSITLRPGDFCGEELLTWALMPNSTLNLPSSTRTVKALSEVEAFALEAEDLKFVASQFKRLHSKKLQHAFRYYSQQWRTWASCFIQAAWRKYQKRKAARELSLKEGHFYMSLPEKDREMDQSGGSSSSPGNVRKVQNISTTILASRFAANTRKAKLRGSDPVPQLFKPDEPDFSVDREEV 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03231 690 CDD CAP_ED 452 583 IPR000595 -
Arst6g03231 690 SMART cnmp_10 452 583 IPR000595 -
Arst6g03231 690 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 29 683 - -
Arst6g03231 690 Pfam Ion transport protein 52 379 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Arst6g03231 690 Gene3D Helix hairpin bin 376 443 - -
Arst6g03231 690 FunFam Cyclic nucleotide-gated ion channel 1 450 568 - -
Arst6g03231 690 MobiDBLite consensus disorder prediction 626 647 - -
Arst6g03231 690 MobiDBLite consensus disorder prediction 632 647 - -
Arst6g03231 690 SUPERFAMILY Voltage-gated potassium channels 44 374 - -
Arst6g03231 690 Gene3D - 58 375 - -
Arst6g03231 690 SUPERFAMILY cAMP-binding domain-like 382 577 IPR018490 -
Arst6g03231 690 Gene3D Jelly Rolls 450 570 IPR014710 -
Arst6g03231 690 MobiDBLite consensus disorder prediction 664 690 - -
Arst6g03231 690 Pfam Cyclic nucleotide-binding domain 475 563 IPR000595 -
Arst6g03231 690 ProSiteProfiles cAMP/cGMP binding motif profile. 452 582 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03231 Arst-Chr6 99294004 99297656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03231 20 690 Ion Channels AT5G14870 67.536 0.0 983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03231 K05391 - gmx:100802812 1158.67