Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03220 ATGCAGCTCAATCACCTCTGCATTGTTCTTCCACCAAATTCCGGTGAAATGGATCAACCTGATCAGAAGCCTTTCCAACTACCAAAGAAACAAGTCAAGGCTCCTCATCATCATAGAGGTTGTGGGAGGCAAGTAGTTTCTTTGCTCCAAGATTCTTTGAGGAAGTTATACGGCTTAAAAGGGTGGACAATTTGCAAGCATGGAGTGAAGAAAGAGAAGTGTTCCGGCGGCGGCGCGTTTCACGACATGGACGGGGTGCAAGTTTCAGCCAAGATAGGGAGGGACAACCCCAGGATTTTCAGCTATGCAGAGCTCTTCATAGGGTCCAAAGGTTTCAGCGAAGAGCAAGTTCTTGGAAGTGGAGGGTTCGGAAAAGTTTACAAGGCGGTTTTGCCGAGTGACGGAACTGTTGTAGCCGTTAAATGCTGCTTGGCGGGGAAAGGGAAGCAATTTGAGAAGAGTTTTGAAGCAGAGTTAACGGCGGTTGCGGATCTTCGCCACAAGAATCTTGTGAGGCTTAGAGGATGGTGTGTTCATGAAGACCAGTTGCATCTTGTATATGACTACATGCCTAACAGCAGCCTTGACCGTATACTCTTCCGGAAGCTGGAGAATTCGAAGATTGAGCTTCTTGATTGGGAACACAGAGTGAAAATTGTGAAAGGTTTAGCGGCGGCATTGCATTATCTCCATGAACAATTGGAAACTCAAATCATTCATAGGGATGTGAAGACCAGCAATGTGATGCTTGATTCGCATTTCAATGCCAAACTAGGTGACTTTGGCATGGCAAGGTGGCTAGAACATGAGCTTGAGTTCAAGCCGAGAAAAATATCAACAAGAATTGACAATTTCCGTTTGGGAGACACGTCGAGAATCGGAGGAACGATTGGGTATCTCCCCCCTGAAAGCTTGCAGAAAGCAGGCAATGCTACTTCGAAATCCGATGTGTTCAGCTTCGGAATAGTTCTTCTAGAAGTGGCTTCTGGAAGGAGAGCCATAGACCTGGCTTATCCAGATGATGAAATTATTTTGCTTGATTGGATGAGAAGACTCTCCGATGTAGGGAAGCTTCTGGAAGCAGGGGATACAAGGCTTCCAGATGGTTCCTACAAGCTTTCAGAGATGCAGCATCTCATTCACATTGCTCTTCTCTGCACTCTCCAAGAACCGCAGCTGCGTCCCAGCATGAAATGGACTGTGGAAGCACTTTCCGACGTGTCATGCAAGTTGCCAGCCCTCCCTTCGTTTCAATCTCACCCTCTATACATCTCTTTGTCATCCGCATCGGAGACTAGTCATAGCAGCGCAAGCGGCAACAGCTTTGCTACCGAGAATAACTATCACACAGCGGCAGGGGAAACCGTATTCATAACCGCTGAAAACAGAAACAGTGAGACCATGTCTTCAAGGAGCACCAATCAGCAGCGGCGATTTCCTGTGCTGGAGACGCCAAGGGAAATATCATTCAAGGAAATCGTTTCAGCTACAGACAATTTTTCAGATTCAAGGAGGGTGGCAGAGCTAGACTTTGGAACTGCTTATCATGGAATCCTACATGACAATTGCCATGTTTTAGTGAAACGCCTCGGGATGAAAACTTGCCCTGCGTTGCGTGACAGATTCTCCAATGAACTCCGGAATCTAGGAAGGCTTCGCCACAGGAATTTGGTGCAGCTTCGAGGATGGTGCACCGAGCAAGGCGAGATGCTTGTTGTGTATGACTACTCAGCTAGAAGAATTCTGAGTCAAATGCTTCTCCGTCATAACAATCATAGATCCGGAGATTCTTCTGTCCTTCAGTGGCATCACAGGTATTACATATCGAAAACCCTTGCTTGTGCAGTTCTGTATCTACATGAGGAATGGGATGAGCAAGTCATTCATAGAAACATTACCTCTTCAGCTATCATTCTTGAGCAAGATATGAATCCCAGACTTGGTTGTTTTGCTCTTGCTGAGTTTTTGTCAAGGAATGAACACGGCCACCATGTAATCACAGACACTAGCAAATCGGCTCGCGGCATTTTTGGCTACATGTCACCAGAATACGTGGAATCCGGCGAAGCAACGCCCGCAGCTGATGTTTACAGTTTCGGAGTTGTGGTTCTTGAAGTTGTAAGTGGACAGATGGCAGTAGACTTTAGGCAGCCGGAGGTTCTGTTGGTGAAGAAAGTTCATGAATTCGAGATGCGAAAAAGGCCATTGAAGGAATTAGCAGACAAAAGACTCAATGGAGAGTACAATGAGAAAGAACTGCTGAGATTGATAAGACTGGGAATCGCATGCACCCGCTGTGACCCACAATTAAGGCCAAGCATGAGGCAAATTGTAAGCATCCTTGATGGCAAGGACAGCTTACTCGTCGAACCGAACAAAGAGAGCAGGGAAGAATGGAGAGAAAGAAATGCAATTTCTTTGTCACTCATTAGGAGAATCCAAGCTCTAGGAATACAGTAA 2460 0.463 MQLNHLCIVLPPNSGEMDQPDQKPFQLPKKQVKAPHHHRGCGRQVVSLLQDSLRKLYGLKGWTICKHGVKKEKCSGGGAFHDMDGVQVSAKIGRDNPRIFSYAELFIGSKGFSEEQVLGSGGFGKVYKAVLPSDGTVVAVKCCLAGKGKQFEKSFEAELTAVADLRHKNLVRLRGWCVHEDQLHLVYDYMPNSSLDRILFRKLENSKIELLDWEHRVKIVKGLAAALHYLHEQLETQIIHRDVKTSNVMLDSHFNAKLGDFGMARWLEHELEFKPRKISTRIDNFRLGDTSRIGGTIGYLPPESLQKAGNATSKSDVFSFGIVLLEVASGRRAIDLAYPDDEIILLDWMRRLSDVGKLLEAGDTRLPDGSYKLSEMQHLIHIALLCTLQEPQLRPSMKWTVEALSDVSCKLPALPSFQSHPLYISLSSASETSHSSASGNSFATENNYHTAAGETVFITAENRNSETMSSRSTNQQRRFPVLETPREISFKEIVSATDNFSDSRRVAELDFGTAYHGILHDNCHVLVKRLGMKTCPALRDRFSNELRNLGRLRHRNLVQLRGWCTEQGEMLVVYDYSARRILSQMLLRHNNHRSGDSSVLQWHHRYYISKTLACAVLYLHEEWDEQVIHRNITSSAIILEQDMNPRLGCFALAEFLSRNEHGHHVITDTSKSARGIFGYMSPEYVESGEATPAADVYSFGVVVLEVVSGQMAVDFRQPEVLLVKKVHEFEMRKRPLKELADKRLNGEYNEKELLRLIRLGIACTRCDPQLRPSMRQIVSILDGKDSLLVEPNKESREEWRERNAISLSLIRRIQALGIQ 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03220 819 FunFam Receptor like protein kinase S.2 578 804 - -
Arst6g03220 819 SUPERFAMILY Protein kinase-like (PK-like) 476 784 IPR011009 -
Arst6g03220 819 Gene3D Transferase(Phosphotransferase) domain 1 190 410 - -
Arst6g03220 819 FunFam Receptor like protein kinase S.2 86 189 - -
Arst6g03220 819 Gene3D Phosphorylase Kinase; domain 1 84 189 - -
Arst6g03220 819 ProSiteProfiles Protein kinase domain profile. 500 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03220 819 Pfam Protein tyrosine and serine/threonine kinase 506 781 IPR001245 GO:0004672|GO:0006468
Arst6g03220 819 ProSiteProfiles Protein kinase domain profile. 112 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03220 819 FunFam Receptor like protein kinase S.2 190 410 - -
Arst6g03220 819 Pfam Protein kinase domain 113 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03220 819 ProSitePatterns Protein kinases ATP-binding region signature. 118 147 IPR017441 GO:0005524
Arst6g03220 819 SUPERFAMILY Protein kinase-like (PK-like) 96 434 IPR011009 -
Arst6g03220 819 SMART serkin_6 112 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03220 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Arst6g03220 819 Gene3D Transferase(Phosphotransferase) domain 1 582 802 - -
Arst6g03220 819 Gene3D Phosphorylase Kinase; domain 1 459 576 - -
Arst6g03220 819 CDD STKc_IRAK 511 783 - -
Arst6g03220 819 PANTHER - 89 406 - -
Arst6g03220 819 FunFam Receptor like protein kinase S.2 460 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03220 Arst-Chr6 99183515 99186342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03220 486 792 Receptor kinase-like Gene Family AT5G55830 36.013 5.40e-52 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Arst6g03220 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03220 - - vun:114184452 1278.46