Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03208 ATGGATTATTCCAGAATTATCGAGTCTTCAGAAACTCACAGGAATAAGTGTGCGGCATGCTTCAGACAGTTCAACAAACTGGAGCACTTGGTGGAGCACATGAGAATCTCATACCATTCGGGTCATGAACCAACTTGTGCCATTTGCAGAAAACACTGCAGGTCATTTGAGTCTCTAAGGGAACACCTTATAGGTAATATATAAATCCATAATAATTGCAAGTTTTGCTTGAAGGTGTTTGACAGCCCTAACTCGCGCAGGGTTCACCAAGAAAAATGCCAACTCTCTGGACTAACTGGAATGATTGGTCGGTTTTCTAGCATGGGTCTTCGAGATAATTTGACAATTGGATCAAGAGGAGCACCAGTAGTTGCACTTGCTTGTAAAATGGTTGGTGGTGGCAGTGATGGCTCACTTGATCTTTGTGCAAGAGTCTGCATAATTGATGAGCATGAGAACATCATCTTTCATTCTTATGTCAAACCACCATTTCCAGTCACTAATTATAGGTACGAGACAACAGGTATTAGAGCAGAATATTTGAGGGATGCAATACCAATGAGGCAAGTTCAGAGGAAGATTCAAGACTTCCTTTGCAATGGAGAGCCCATGTGGACAATTAGAGCAAGAGGTGGCAAGGCCAGGATTCTTGTTGGTCATGGTTTGGATCATGACCTAGAATGTCTCCAAATAGAATATCGACCAGAAAAGATAAGGGACACTGCAAAATACCCTCCTCTGATGAAAACAAGCAAGTTGAGCAACTCACTTAAATACTTAACACAAACATATCTAGGGTATGACATTCAAACTGGGATACAGGATCCTTATGATGATTGTGTTGCAACAATGAGACTCTACAAGAGAATGAGGTCCCAGGCACATAGAATGGAGGATTACCCTTTGGCATCTGACCCTCAGAACAGAAACAATTTTGCTTCTTGGAGACAAAGTGAGCTTGAAAGAATGAGTCCTGAACAAATGCTTGAAATTTCAAGGTCTGATTACTATTGCTGGTGCATGGATTCCTTATATACCTCATGA 1044 0.4138 MDYSRIIESSETHRNKCAACFRQFNKLEHLVEHMRISYHSGHEPTCAICRKHCRSFESLREHLIGNIXIHNNCKFCLKVFDSPNSRRVHQEKCQLSGLTGMIGRFSSMGLRDNLTIGSRGAPVVALACKMVGGGSDGSLDLCARVCIIDEHENIIFHSYVKPPFPVTNYRYETTGIRAEYLRDAIPMRQVQRKIQDFLCNGEPMWTIRARGGKARILVGHGLDHDLECLQIEYRPEKIRDTAKYPPLMKTSKLSNSLKYLTQTYLGYDIQTGIQDPYDDCVATMRLYKRMRSQAHRMEDYPLASDPQNRNNFASWRQSELERMSPEQMLEISRSDYYCWCMDSLYTS 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03208 347 Pfam Exonuclease 141 287 IPR013520 -
Arst6g03208 347 CDD REX4_like 124 288 IPR037431 GO:0006364|GO:0008408
Arst6g03208 347 SMART c2h2final6 15 39 IPR013087 -
Arst6g03208 347 SMART c2h2final6 44 70 IPR013087 -
Arst6g03208 347 SMART c2h2final6 71 91 IPR013087 -
Arst6g03208 347 FunFam RNA exonuclease 4 119 306 - -
Arst6g03208 347 SUPERFAMILY Ribonuclease H-like 136 292 IPR012337 -
Arst6g03208 347 ProSitePatterns Zinc finger C2H2 type domain signature. 17 39 IPR013087 -
Arst6g03208 347 Gene3D - 120 305 IPR036397 GO:0003676
Arst6g03208 347 ProSiteProfiles Zinc finger C2H2 type domain profile. 15 44 IPR013087 -
Arst6g03208 347 SMART exoiiiendus 122 296 IPR013520 -
Arst6g03208 347 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 19 340 IPR047021 GO:0004527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03208 Arst-Chr6 98973795 98976772 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03208 1 344 C2H2 Transcription Factor Family AT3G27970 71.910 0.0 542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03208 6 98973795 98976772 Arst6g03208 6 98973795 98976772 ECH