Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03188 ATGACTCATAAGAAGAAGAAAATCTCATCTTCGTCACCATCATCATGCGTAATCTTCGCAATATTTTTTTTCAGCCTCTCATGTCGCTGCCATCTCACACTCTCCGATCCAAGAATCTCAGAAGCAGGACTCAGCTGCGGCACAACCAAGGCCCCACTAGACTCCAACTACGTCCCAAGCTTCATCAAAGAAATGGAGTTCCTCTCTCAGCAAGTAACCGCTCATAACTGGGGTACACATTCCGTCGACGGCGGCGGTGGCACCGTCTACGGCCTCGCGCAGTGCTTCAACGACCTCTCCCACACAGACTGCCTCCTCTGCTACGCCGCAAGCCGGACCACCCTCCCCCGCTGCCTCCCCTCCCTCTCCGCCCGCATCTACCTCGACGGCTGCTTCCTCCGTTACGACCGTTACCGCTTCTACTCCGAGGAGACCGACCCCGTCAGGGACACCGTCAACTGCACCGGAGGGAATGTGGAGGGGGTGGCTCATCAGAGGAGTGTTGAGAGGGTAGTTGACAGTGTTGTTCTGAAGGCCGTCGCTAAAGGTGGCGGTTTTGCCGTGGGAGAGATTGATAGAGTTTACGCTTTGGCGCAGTGCTGGAAAACCGTCGGGAATGATGGTTGCAGAAACTGTTTGAGGAAAGCTGGGAAGCAAGTCAGAGGTTGCTTGCCTAAAAAAGAAGGGAGAGCCTTAAATGCTGGCTGTTATTTGAGGTATTCAACGGTGAAGTTCTACAATGAGCAGCGTGTAGTTGAAGCTGGAAGCAGGCCTCTTAGGAGAGGAGTAATAATAGCAGCAGTGTTAGCAGTAGCTGCAGTTATAATGCTTTCTATTTCAGCCTCTTATGCGGCCTTCACCAAATTCTCAAAGATTAAAAAAGAAAACAATAATCGTGGTCAGATTTGCTCTTCCATAAGGGAGTCTAGCTTGAATTACAAATATGAAACTCTTGAGAAAGCCACGGATTATTTCAACCCTTCAAGAAAAGTAGGCCAAGGCGGAGCTGGTTCGGTATTCAAAGGTGTTCTCCCAAATGGGAAAGTTGTTGCTGTTAAGAGGTTGGTCTTCAATAACAGGCAATGGGTGGATGAGTTCTTCAATGAAGTAAACTTAATTAGTGGAATTGAACATAAGAACCTTGTCAAACTATTGGGTTGTAGCATTGAAGGCCCTGAGAGCCTCCTTGTTTATGAGTTCCTTCCCAACAAGAGTTTAGATCAATTTATCTTTGAAAAGAACAAAACTCAGAACCTAAACTGGAAGCAGAGGTTTAATATCATTCTTGGAACAGCAGAAGGGCTTGCATATCTTCATGGAGGCTCCAAAATGAGAATCATTCATCGAGACATCAAAAGCAGTAACATTCTTCTGGATGAGAATCTTACACCTAAGATTGCGGATTTTGGTCTTGCTCGCTGTTTTGGTGCTGATAAGACACATTTGAGCACTGGAATTGCTGGAACACTAGGTTACATGGCTCCTGAGTACCTAATTCGAGGACAACTTACCGATAAAGCCGATGTCTACAGTTTTGGAGTACTTGTTCTTGAGATTGTATGTGGCAGGAGGAATAATGTCTTCAGAGAGGACTCTGGTTCCCTTTTGCAGACAGTTTGGAAACTGTACAGATCAAACACACTGGCTGAAGCTGTTGATTCTTCTTTGAGAATTAATGAGTATCCTTCAAATGAAGCTTTAAGAGTGCTTCACATTGGATTGCTATGCACACAAGCTTCTGCTTCCTTAAGGCCATCCATGACTCAAGTTGTGAACTTGTTAACTAATTCGAATTTGGATTTTCCTACACCAACTCAACCACCTTTTATGAACACGGGTGTGCCTGACTCAGATAGCTCCATTAGATCTTATAGCACAAATAGCTTTGTGTCAAATGCATTGAAGAAGATTGGAGTTTCCAACAGCTTCTCAGAGTCATCGAGTTCGCGCAGTTCGGATAGGCCATCATCAAGAATTGAAGAACCAATTGTCCAAGCTTGA 2001 0.4573 MTHKKKKISSSSPSSCVIFAIFFFSLSCRCHLTLSDPRISEAGLSCGTTKAPLDSNYVPSFIKEMEFLSQQVTAHNWGTHSVDGGGGTVYGLAQCFNDLSHTDCLLCYAASRTTLPRCLPSLSARIYLDGCFLRYDRYRFYSEETDPVRDTVNCTGGNVEGVAHQRSVERVVDSVVLKAVAKGGGFAVGEIDRVYALAQCWKTVGNDGCRNCLRKAGKQVRGCLPKKEGRALNAGCYLRYSTVKFYNEQRVVEAGSRPLRRGVIIAAVLAVAAVIMLSISASYAAFTKFSKIKKENNNRGQICSSIRESSLNYKYETLEKATDYFNPSRKVGQGGAGSVFKGVLPNGKVVAVKRLVFNNRQWVDEFFNEVNLISGIEHKNLVKLLGCSIEGPESLLVYEFLPNKSLDQFIFEKNKTQNLNWKQRFNIILGTAEGLAYLHGGSKMRIIHRDIKSSNILLDENLTPKIADFGLARCFGADKTHLSTGIAGTLGYMAPEYLIRGQLTDKADVYSFGVLVLEIVCGRRNNVFREDSGSLLQTVWKLYRSNTLAEAVDSSLRINEYPSNEALRVLHIGLLCTQASASLRPSMTQVVNLLTNSNLDFPTPTQPPFMNTGVPDSDSSIRSYSTNSFVSNALKKIGVSNSFSESSSSRSSDRPSSRIEEPIVQA 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03188 666 FunFam Cysteine-rich receptor-like protein kinase 2 401 601 - -
Arst6g03188 666 Gene3D Transferase(Phosphotransferase) domain 1 401 601 - -
Arst6g03188 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Arst6g03188 666 FunFam Cysteine-rich receptor-like protein kinase 2 39 140 - -
Arst6g03188 666 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 90 644 - -
Arst6g03188 666 MobiDBLite consensus disorder prediction 640 666 - -
Arst6g03188 666 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Arst6g03188 666 FunFam Cysteine-rich receptor-like protein kinase 2 291 400 - -
Arst6g03188 666 Pfam Protein kinase domain 327 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03188 666 CDD STKc_IRAK 331 596 - -
Arst6g03188 666 Gene3D Phosphorylase Kinase; domain 1 285 400 - -
Arst6g03188 666 FunFam Cysteine-rich receptor-like protein kinase 3 150 245 - -
Arst6g03188 666 SUPERFAMILY Protein kinase-like (PK-like) 309 627 IPR011009 -
Arst6g03188 666 Pfam Salt stress response/antifungal 163 242 IPR002902 -
Arst6g03188 666 Pfam Salt stress response/antifungal 76 138 IPR002902 -
Arst6g03188 666 ProSiteProfiles Gnk2-homologous domain profile. 39 140 IPR002902 -
Arst6g03188 666 SMART serkin_6 325 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03188 666 Gene3D - 42 140 IPR038408 -
Arst6g03188 666 Gene3D - 151 245 IPR038408 -
Arst6g03188 666 ProSiteProfiles Protein kinase domain profile. 325 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g03188 666 ProSiteProfiles Gnk2-homologous domain profile. 146 245 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03188 Arst-Chr6 98702867 98706130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03188 17 490 Receptor kinase-like Gene Family AT5G40380 56.133 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst6g03188 Pkinase 6.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03188 - - gmx:100790404 972.615