Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03179 ATGGCGTCTTCAAGCTATTCGAATTCACCCTGCGCTGCCTGCAAGTTCTTGAGAAGGAAATGCATGCCGGATTGCATCTTCGCGCCGTATTTCCCACCGGAAGAGCCTCAAAAGTTCGCGAACGTTCACAAGATATTTGGGGCAAGCAACGTGAGCAAGCTTCTGAATGAGGTGCAACCCCATCAGAGGGAGGACGCCGTGAACTCTCTGGCGTACGAGGCGGAGGCGCGAATCAAGGATCCGGTCTACGGCTGCGTTGGGGCCATTTCAGTGCTCCAGCGGCAGGTGATTAGGCTCCAAAAGGAACTTGATGCCACAAATGCAGATTTGATCCGCTATACCTGTAATGAGATGACAACTTTGCATGATGGGAGAAGAATTGGTGAAGCTTCTTCCACTTTTTCTCAATCTCCTAGTGCTTATTATTATCCATCTCCTTGGAACAATGATCCTTGTGCTGGGGATGCTGGATTTCACAGAGGAGGTGGTAACCATATGTGA 501 0.499 MASSSYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLIRYTCNEMTTLHDGRRIGEASSTFSQSPSAYYYPSPWNNDPCAGDAGFHRGGGNHM 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03179 166 Coils Coil 89 109 - -
Arst6g03179 166 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Arst6g03179 166 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Arst6g03179 166 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03179 Arst-Chr6 98531413 98532898 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03179 4 126 AS2 family AT3G27650 78.571 4.14e-71 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst6g03179 LOB 9.1e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03179 - - gmx:100306630 283.493