Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03177 ATGAAGACATCATCATTCACTGACCTCCTTTCAAACAACTATAGTAACATAAACATGAACATGGATGATTTTGGTGATGCTCTTATTCAAAACCAAGAATCTGTTCCAAAATTCAAGTCTGTTACACCACCTTCACTACCACTTGAGAACTCACAAACTTCTTCTTACTTTCCTTTTACATCATCAACTTTTAGCCCAACTGAGTTTTTGAACTCATCTTTGTTCCTTTCTTCTCCTAATATTTTTGCATCTCCTACTATTGAGGCTTTTGCTGGCCACAGCTTCAACAACAAGGAAGATGAGAAGAACTTCTCTGAATTCTCTTTCCAAACACAGACTAAGACAGCTTCTCCCTCTCAAGCAGAACCACTTAAGACACAAGACATGTGGAAATTCACAGAACCTATAAACCAAGCTGAATTTTCATCTCAGAGGGAAGCAACAAAATCTGAATATCCATCAACACAGAGCTTCTCCTCAGAAATGGTAGCAACAAAACCCGAATTACAAAGCAATTCGGTGCCTGAGTCCGGTTCTTTCAACTATGCTAACACGTCTCAGTCCATTAAAGAACAAAGGAGATCAGAAGATGGTTACAATTGGAGGAAATATGGACAGAAACAAGTGAAAGGGAGTGAGAATCCAAGGAGCTATTACAAGTGCACGCATCCGAGTTGCGCAATGAAGAAGAAAGTTGAGAGGTCTTTGGAGGGACAAATTACTGAGATAGTGTATAAGGGAACTCATAATCATCCTAAGCCACAGAGTACTAGAAGAAGTTCAAGCTCTCAACAAATTATTCATCAGCAGCCTTCTTCATCCTGCACTAACTCAGGAATCTCGGATCAGTCAGTGGTGACACTAGGCAATCCTCAACTTGATCGTGTGTCGATGCAAGAAGATTCTTCAGCTTCTATGGGAGAGGAAGAATTTGAACAAACTTCTCCAACAAGTTACTCTGGTGGAGATGCAGATGAACTTGGACCAGATGCCAAAAGATGGAAGGGGGAGAATGAACATGATGGTCATTCAGCCTATGGAAGTAGAACTGTTAGGGAACCTAGAGTTGTAGTTCAAACTACAAGCGAAATCGATATTCTTGATGATGGCTACAGATGGAGGAAATATGGACAGAAAGTAGTTAAAGGAAATCCAAATGCAAGGAGTTATTACAAATGCACAGCCCCTGGTTGTTCAGTGAGGAAACATGTTGAGCGAGCCGCGACTGATATAAAATCAGTGATCACAACTTATGAAGGGAAACACAACCATGATGTGCCTGCAGCACGCGGCAGCGCAGGTTACAACATGAACAGAAACTCTCTAAATAGAAACAATAGCAATGCACCGGCGGCACCAATAAGGCCTGCGGCCGTGAATGGTTATTCTAGCGCGCCGAATTTCACAAATTCACTTTACAATCCTAGGCTTCCGGCCACCGGAACTCAAGAATCATCTTCCCTAGACATGCTGCAAGGCTCTGGACTTTTCGGCTACACGTCTCTTGGAAGATCAATGGGTTCATATGGAAACAATTCGCAACTCTCGGATGGTGTATACATCAAGGCCAAGGATGAAAGGAAGGATGACTCATTCCTTGAGTCATTTCTTTCAAAGAACTAA 1623 0.4196 MKTSSFTDLLSNNYSNINMNMDDFGDALIQNQESVPKFKSVTPPSLPLENSQTSSYFPFTSSTFSPTEFLNSSLFLSSPNIFASPTIEAFAGHSFNNKEDEKNFSEFSFQTQTKTASPSQAEPLKTQDMWKFTEPINQAEFSSQREATKSEYPSTQSFSSEMVATKPELQSNSVPESGSFNYANTSQSIKEQRRSEDGYNWRKYGQKQVKGSENPRSYYKCTHPSCAMKKKVERSLEGQITEIVYKGTHNHPKPQSTRRSSSSQQIIHQQPSSSCTNSGISDQSVVTLGNPQLDRVSMQEDSSASMGEEEFEQTSPTSYSGGDADELGPDAKRWKGENEHDGHSAYGSRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAATDIKSVITTYEGKHNHDVPAARGSAGYNMNRNSLNRNNSNAPAAPIRPAAVNGYSSAPNFTNSLYNPRLPATGTQESSSLDMLQGSGLFGYTSLGRSMGSYGNNSQLSDGVYIKAKDERKDDSFLESFLSKN 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03177 540 SMART WRKY_cls 367 426 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst6g03177 540 SMART WRKY_cls 195 253 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst6g03177 540 ProSiteProfiles WRKY domain profile. 362 427 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst6g03177 540 Pfam WRKY DNA -binding domain 196 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst6g03177 540 Pfam WRKY DNA -binding domain 368 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst6g03177 540 ProSiteProfiles WRKY domain profile. 190 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst6g03177 540 MobiDBLite consensus disorder prediction 326 346 - -
Arst6g03177 540 MobiDBLite consensus disorder prediction 142 218 - -
Arst6g03177 540 MobiDBLite consensus disorder prediction 250 321 - -
Arst6g03177 540 FunFam WRKY transcription factor 33 354 420 - -
Arst6g03177 540 SUPERFAMILY WRKY DNA-binding domain 191 254 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst6g03177 540 Gene3D WRKY domain 181 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst6g03177 540 Gene3D WRKY domain 352 428 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst6g03177 540 MobiDBLite consensus disorder prediction 142 189 - -
Arst6g03177 540 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 87 446 IPR044810 GO:0003700
Arst6g03177 540 MobiDBLite consensus disorder prediction 245 346 - -
Arst6g03177 540 SUPERFAMILY WRKY DNA-binding domain 359 427 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst6g03177 540 FunFam WRKY transcription factor 184 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03177 Arst-Chr6 98501149 98504099 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03177 35 537 WRKY Transcription Factor Family AT2G38470 46.300 1.46e-115 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst6g03177 WRKY 1.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03177 K13424 - gmx:100792833 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g03177 6 98501149 98504099 Arst6g03177 6 98501149 98504099 ECH
Arst6g03177 6 98501149 98504099 Arst2g02708 2 83477726 83483733 PCT