LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst6g03166	ATGGAGTCAGCTGTTGATGAAATTGAGTCTTTGCCAGAGGTTCAGAATTCAGTTTCTGGGGTAGATCATGATCCTCCTTCGACATCTGGGACTCCGAATTCGACCGCTCCTCATACTTTCGGCCTCAATGACACAGTTGAGAGTTGCTTAGCGAAGAACATTGTCACAATGGAAAAGAAATTGTGCATCAAACCAAAGTTTGAAGATGCCAAGAATTATGATTTGAGCAGCCAAATGGAATCTGGGAAACACAAATCTGGTGCATTGAATGGAGTTGCTGATCAATCGGAGATTACTTGTTGTCCGAGCCCTCAGAATAGTTTCTATTCAGAAGCCAAACAAAGCTCTACAATTGCTGGAGTGAGTGAATGTGTAAGTGTTGATAAGTCTGTTGAAAGCGGAGAAGCTGTGAATTCGGTCGAATTCAACGAGAGCAGGAAGAGCAGCATCTGTAGAGGGAGTACAGGAAGTGATGTTAGTGATGAGAGCAGCACCAGTAGCTTCAGTAGTGCTTTGTATAAACCCCATAAGGCAAATGATATAAGATGGGAAGCAATTCAAGCTGTCCGAGCTCGGGATGGAGCTTTGGAAATGAGGCATTTCAGGTTGTTGAAGAAATTGGGGTGTGGAGACATAGGAAGTGTATATCTAGCTGAGTTAGGTGGCACAAGGGCTTGTTTTGCTATGAAAGTAATGAACAAAACGGAGCTGGCGAATCGCAATAAGCTCCAGAGGGCTCAAACGGAGAGAGAGATATTGCAGTCTCTTGATCATCCTTTTTTACCAACTTTGTATACTCACTTTGAGACAGAGACATTCTCTTGCTTGGTAATGGAGTTTTGCCCCGGCGGGGATCTGCATGCACTCAGACAAAGACAGCCGGGGAAGTATTTTTCCGAGCATGCTGCCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAATCATCTACAGAGACCTTAAACCGGAAAACGTGTTGGTGAGGGAAGACGGTCATATAATGCTGTCGGACTTCGATCTCTCTCTAAGGTGTGCAGTCAGTCCTACTGTTGTAAAGTCCACAAACTCTTTCTTGGAAATGAAAACCTCAGGATATTGTGTTCAGCCGGCCTGCATTGAGCCGACTTGCGTGATGCAGCCGGACTGCATCCAGCCTTCATGTTTTACGCCACGCTTTCTTAAAGGGAAGTCGAAGAAGAAAGAAAAGAAGTCAAAACAAAAGAATGATGTGCATAATCAGGTGACTCCTCTCCCTGAGCTCATCGCCGAGCCCACGAATGCGAGATCAATGTCATTTGTAGGAACACACGAATACTTGGCACCCGAAATAATCAAAGGTGAAGGACATGGTAGTGCTGTAGACTGGTGGACATTTGGGATATTCTTGTATGAGCTTTTGTTTGGTAGAACACCATTCAAAGGCTCAGCAAACAGAGCAACTCTGTTTAATGTTGTTGGCCAGCCCTTAAGGTTCCCAGAAACCCCTACAGTAAGCTTTGCAGCCAGGGACTTAATCCGGGGTTTACTCGTGAAAGAGCCGCAGAATCGGCTGGCCTATCGACGCGGAGCGACAGAGATAAAACAACATCCGTTCTTTCATAATGTTAACTGGGCGCTGATCCGCTGTGCGAGTCCTCCAGAGGTGCCAAGGCAGGCCATGAAGGCCCTCGCAGCGGAAAAGCCGCCTGGTGTCAAGCCTTCTGGTAACTATTTAGATATTGATTTCTTTTGA	1752	0.4589	MESAVDEIESLPEVQNSVSGVDHDPPSTSGTPNSTAPHTFGLNDTVESCLAKNIVTMEKKLCIKPKFEDAKNYDLSSQMESGKHKSGALNGVADQSEITCCPSPQNSFYSEAKQSSTIAGVSECVSVDKSVESGEAVNSVEFNESRKSSICRGSTGSDVSDESSTSSFSSALYKPHKANDIRWEAIQAVRARDGALEMRHFRLLKKLGCGDIGSVYLAELGGTRACFAMKVMNKTELANRNKLQRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVKSTNSFLEMKTSGYCVQPACIEPTCVMQPDCIQPSCFTPRFLKGKSKKKEKKSKQKNDVHNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPETPTVSFAARDLIRGLLVKEPQNRLAYRRGATEIKQHPFFHNVNWALIRCASPPEVPRQAMKALAAEKPPGVKPSGNYLDIDFF	583

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst6g03166	583	PANTHER	FLIPPASE KINASE 1-RELATED	84	562	-	-
	Arst6g03166	583	FunFam	serine/threonine-protein kinase D6PK-like	434	557	-	-
	Arst6g03166	583	FunFam	Serine/threonine-protein kinase D6PK-like	199	284	-	-
	Arst6g03166	583	FunFam	serine/threonine-protein kinase D6PK-like	285	352	-	-
	Arst6g03166	583	Pfam	Protein kinase domain	202	355	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst6g03166	583	Pfam	Protein kinase domain	436	539	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst6g03166	583	SUPERFAMILY	Protein kinase-like (PK-like)	179	558	IPR011009	-
	Arst6g03166	583	SMART	serkin_6	201	539	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst6g03166	583	MobiDBLite	consensus disorder prediction	1	39	-	-
	Arst6g03166	583	CDD	STKc_phototropin_like	199	559	-	-
	Arst6g03166	583	MobiDBLite	consensus disorder prediction	10	39	-	-
	Arst6g03166	583	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	322	334	IPR008271	GO:0004672\|GO:0006468
	Arst6g03166	583	Gene3D	Transferase(Phosphotransferase) domain 1	285	361	-	-
	Arst6g03166	583	ProSiteProfiles	Protein kinase domain profile.	201	539	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst6g03166	583	Gene3D	Transferase(Phosphotransferase) domain 1	433	557	-	-
	Arst6g03166	583	Gene3D	Phosphorylase Kinase; domain 1	199	284	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst6g03166	Arst-Chr6	98362377	98366253	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst6g03166	105	583	AGC Kinase Gene Family	AT5G47750	71.026	0.0	695

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Arst6g03166		Pkinase	7.3e-38	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst6g03166	K08286		-	gmx:100802402	943.725