Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03139 ATGAGTCAATGTCTTTCCCACGCTCCCACACAAGAAAGTCTCACCCTTTTTTATCACTTTTATTTTCTACTCCCCCTTCCTTCACTCTGCTTCCAAATAGTGAGCAGTGAGGGAGTGATGTGTAACAAGAATAGCCCTCCTCCTTCAGTAGAAACCCAAAAGAAAGAACCAAGTATGAGGAAAACCAGAAAACGAACAAATAAACTGTCTCCTTCTTTAACTTCTTCTTCTTCTACTACCACCGCATCTCTTAAACCACTACGTCGCAGAAACAGAACCAAAACCAGAAAGCCAAAGTACCTCAGTCTCCGCCTCATAAAAAAGAATAACAAAGATGAGAAACAGCCACAGCTGAACCTCTTCCCTCTGCATCCGCAAAACACGGTCGACGATAAAGACATGCAGGAGGAGAACAACTCCGTGGCGTTGCTCTTCAGCTCCGACGGCGGCGCCACCCTCAACGGCCTGCTGGAAGACGACAGTACCGCGACGACTTCGACGGCGATGTCGGAGGAGGGGTCGTTCTCTCCGGCGGCGGGTGTGGGCGGCGACGGAGGGTGGCTGGTTCGGAAAGCGATGAGGAGGAGGGAGGAAGAGGGGAGTGAAGAAGAGAGGTGGGTGTGTTACTCAGAAGTGGTGGAGAAGAAGGAGACGATGGAGGAAGTAACGAGTTATTGCGGAACGACGTCGTTTGGGTTGTTGTCATTGAAGCTGGATCATGAGGGGATATTGAATGCTTGGTCTGATAAGGGCTCCCTTTACATTGCAGGGGAGGCCCCACAGACTGTCCCTGATTTCCACAATCATGCTCTCTTCTATAATGCTCTTCTTCCCAATAATATTGGAGGTGATGGGTGTGGAAGTAATGATGGCACTGGGAACACATGGGTTGTACCGGAAATTGGTGGAGAGAACAGGACGACAACGGAAGAAATGGGGTTGAAGGTGGGACAGAGAGAGGCAAGCGTGCAGAGATACAAAGAGAAGAGACAGAACAGGCTCTTCTCTAAGAGGATCCGTTATGAAGTCCGCAAGCTCAATGCTGAGAAGCGGCCTCGGATGAAGGGACGATTTGTGAAGAGGGAATGA 1089 0.4986 MSQCLSHAPTQESLTLFYHFYFLLPLPSLCFQIVSSEGVMCNKNSPPPSVETQKKEPSMRKTRKRTNKLSPSLTSSSSTTTASLKPLRRRNRTKTRKPKYLSLRLIKKNNKDEKQPQLNLFPLHPQNTVDDKDMQEENNSVALLFSSDGGATLNGLLEDDSTATTSTAMSEEGSFSPAAGVGGDGGWLVRKAMRRREEEGSEEERWVCYSEVVEKKETMEEVTSYCGTTSFGLLSLKLDHEGILNAWSDKGSLYIAGEAPQTVPDFHNHALFYNALLPNNIGGDGCGSNDGTGNTWVVPEIGGENRTTTEEMGLKVGQREASVQRYKEKRQNRLFSKRIRYEVRKLNAEKRPRMKGRFVKRE 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03139 362 MobiDBLite consensus disorder prediction 68 86 - -
Arst6g03139 362 MobiDBLite consensus disorder prediction 41 97 - -
Arst6g03139 362 Pfam CCT motif 319 361 IPR010402 GO:0005515
Arst6g03139 362 ProSiteProfiles CCT domain profile. 319 361 IPR010402 GO:0005515
Arst6g03139 362 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 41 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03139 Arst-Chr6 97946425 97950802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03139 234 361 C2C2-CO-like Transcription Factor Family AT1G73870 44.961 5.34e-23 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst6g03139 CCT 1.8e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03139 - - gmx:100798231 317.775