Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03115 ATGGGAAGACAACCTTGTTGTGAAAAGGTTGGTTTAAAGAGAGGTCCATGGACTATTGAAGAAGATCACAAGCTCATGAACTTTATCCTCAACAATGGCATCCTTTGCTGGAGAATGGTTCCCAAGCTTGCAGGTTTGCTAAGATGTGGAAAGAGCTGTAGATTGAGGTGGATTAATTATTTGAGGCCTGACCTTAAGAGAGGTGGCTTCACAGAAATGGAAGAGGATCAAATTATACAACTACATTCACGTCTTGGTAACAGGTGGTCTAAAATTGCTTCCCATTTTCCTGGGAGGACAGACAACGAGATCAAGAACCATTGGAACACAAGAATCAAGAAGAGGCTGAAGCTCCTTGGATTAGACCCTGTGACACACAAGCAAATTGAACAGAAAGAACAAACCGATGATGATGAGGACAAAAATAACAACACCAACTTACAGACAACTATTTCACAAAAGCCTCAAGAAAATGCAGAAGAAGAAATTAAATCCATGGAGGAGGAGACGAAAAGAGAAGAAAAGAAGGTGAATTGCTGGGATGATGATAATCCTGAGATTTTGAACGATTTTGACATGATGTGTTCAAAATTCGACTTGGAATCATGGATGGTGAAACAAGAGATCAATAATAATAATACCAGCACTACTACTACTAGTTCACACTGCAGTTCTTCTTCTCTTTCTATTGATGATAATAACTATTCTAGTCACTTTTCTAAGGGTGAATCCAAGAATGACCATGATGATCAGGATAATCTGTTACAGCAATGGATTGAAAGTATGGATTCAATTCTCTCATGGGATGGCTTCAATGCCATTGATCAAGATTTGTTTCTTCAATAG 846 0.3865 MGRQPCCEKVGLKRGPWTIEEDHKLMNFILNNGILCWRMVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEMEEDQIIQLHSRLGNRWSKIASHFPGRTDNEIKNHWNTRIKKRLKLLGLDPVTHKQIEQKEQTDDDEDKNNNTNLQTTISQKPQENAEEEIKSMEEETKREEKKVNCWDDDNPEILNDFDMMCSKFDLESWMVKQEINNNNTSTTTTSSHCSSSSLSIDDNNYSSHFSKGESKNDHDDQDNLLQQWIESMDSILSWDGFNAIDQDLFLQ 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03115 281 Gene3D - 69 116 - -
Arst6g03115 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Arst6g03115 281 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Arst6g03115 281 FunFam MYB transcription factor 68 129 - -
Arst6g03115 281 Coils Coil 156 183 - -
Arst6g03115 281 CDD SANT 16 61 IPR001005 -
Arst6g03115 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Arst6g03115 281 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Arst6g03115 281 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst6g03115 281 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Arst6g03115 281 FunFam MYB transcription factor 11 67 - -
Arst6g03115 281 SMART sant 13 63 IPR001005 -
Arst6g03115 281 SMART sant 66 114 IPR001005 -
Arst6g03115 281 CDD SANT 70 110 IPR001005 -
Arst6g03115 281 MobiDBLite consensus disorder prediction 130 177 - -
Arst6g03115 281 Gene3D - 11 67 - -
Arst6g03115 281 MobiDBLite consensus disorder prediction 157 177 - -
Arst6g03115 281 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst6g03115 281 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03115 Arst-Chr6 97424582 97427632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03115 1 168 MYB Transcription Factor Family AT1G66230 64.912 1.21e-76 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst6g03115 Myb_DNA-binding 4.6e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03115 K09422 - gmx:100783231 346.665