Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03109 ATGGTTAGTGAAGACCAAAAACGAAGCCCCAGAAACCAGAAGTACCCTGCAACTGAGGGAAATGGCCAAAGCCAAAACCTTAACGATGCCGTTTTCAGTCCGCGATTCAAATCTGCGGCAGCTATGGCCGGCTGGGACGAAGAGGCACTGCTTCTCGCAAGCCTCGTCGTTGAAGACACACCCGATAGAGATTTCAAACACAAGAAGCGCTCTGTCTTGAACTCCAAGACTCCACCCACCAATTCAAGAAGAGCACAGAGTTCTCCAGAATCGATACGAGTGGCTGTTCTTGATCTTGACGAAGAAGACACTCCAAGAAAAGATAGTGGGAAAAAGACTAAAGAAAAGAAGGCCACTGTAAACGAAGAGAGTAAAGAAGGAGGGAAGGAATCCGGTGTTGCTGCACTTCCCTGCATTGATAAGCTCAGAGACGAGCTTTCTTGCGCCATTTGTTTGGAGATATGCTTTGAGCCAAGTACCACCCCTTGTGGTCACAGCTTTTGTAAAAAGTGCCTTCGATCTGCTGCAGACAAATGTGGCAAAAAATGCCCAAAATGCAGGCAATTAATAGGCAATGGAAGATCATGCACTGTGAACACTGTTCTCTGGAATACAATACAGCTCCTGTTTCCCCAAGAAGTTGAGGCAAGGAAAGCGGCCGGCGCCATAAATAGCCGGCAACAATCTAAGTGCCTGAGCCCAGAAGCAGCATTTTACAACAATTTAAGGAATGGTGAAAGCACAACAACCAGAGGTGGTGTCAGTACAAGGAGAAGCAGCGGTAGGGCTGCCGCAATAACTGATCAGGAAGCAAGGCGGCTCCAAGGTGTGAGATCAAGAAGAGGGATTACTCCTGCTACACAAACTGAGGATGCAGCAATTGCCCTGAGGCTGCAGAGAGAGGAGTTTATGCAGGCCTTTAGGGGAACACAGGAACAACACCATTCCAGCAGATCCTCATCTGTGGATTTAGCTAGAGAAAATTTGAGGGCAATGGCATCTAGAGCCATGAGTCTTCGCATTAGAGATCGAAGATTTTGA 1041 0.4765 MVSEDQKRSPRNQKYPATEGNGQSQNLNDAVFSPRFKSAAAMAGWDEEALLLASLVVEDTPDRDFKHKKRSVLNSKTPPTNSRRAQSSPESIRVAVLDLDEEDTPRKDSGKKTKEKKATVNEESKEGGKESGVAALPCIDKLRDELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLIGNGRSCTVNTVLWNTIQLLFPQEVEARKAAGAINSRQQSKCLSPEAAFYNNLRNGESTTTRGGVSTRRSSGRAAAITDQEARRLQGVRSRRGITPATQTEDAAIALRLQREEFMQAFRGTQEQHHSSRSSSVDLARENLRAMASRAMSLRIRDRRF 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03109 346 SUPERFAMILY RING/U-box 140 211 - -
Arst6g03109 346 MobiDBLite consensus disorder prediction 63 126 - -
Arst6g03109 346 SMART ring_2 148 186 IPR001841 -
Arst6g03109 346 PANTHER UNCHARACTERIZED 272 338 - -
Arst6g03109 346 MobiDBLite consensus disorder prediction 95 126 - -
Arst6g03109 346 MobiDBLite consensus disorder prediction 13 29 - -
Arst6g03109 346 ProSitePatterns Zinc finger RING-type signature. 163 172 IPR017907 -
Arst6g03109 346 MobiDBLite consensus disorder prediction 1 29 - -
Arst6g03109 346 ProSiteProfiles Zinc finger RING-type profile. 148 187 IPR001841 -
Arst6g03109 346 MobiDBLite consensus disorder prediction 74 89 - -
Arst6g03109 346 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 217 IPR013083 -
Arst6g03109 346 Pfam Zinc finger, C3HC4 type (RING finger) 148 186 IPR018957 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03109 Arst-Chr6 97283337 97285329 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03109 72 238 C2H2 Transcription Factor Family AT5G39550 29.070 2.58e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03109 - - qsa:O6P43_004759 422.55