Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03093 ATGGGTAAGCAGCAGAAGATAGCCATGGAAATTGCCATCAGAGACTTCAACAGATTCAGTAGAACTAAACTCCACTTGGAGGTGCAAAATTCCCGCGGGAATTCGGCTCAAACAGTTGTTAGCGCCATGGATCTTGCACAGAAGAAGCAGTTGCTAGCCATTGTAGGAACAATAACACAGAGCGAAGCATCTTTGGCAACTGAAATTAATAAGGCCACAAAAAACACCCCTATATTATCTCTATCTTCGTTTGCACCCATCACAGAGTTACCCTCTTCTCCATTCCCACAACTAATCCAACTCGGAGATGATATCAACATTCAGATGCAATGCCTTGCAGCCATTGTAGGACACTTCAAGTGGAAAAAAGTGACAACAATATATGAAGTTAATAGCAGGTTTTCTTATGATCCAGGTGTACTAATTTCCCTCTCCAATTCTCTTCGCCATGTTGGATCTGAGATCGTTAACCAGTTAGCATTTCCTTCCTTGTCTTTGCAATCTAGAATCGAAAATGAGCTTAACCAACTCAAGAAGAAGAGTAACAGGGTCTTCTTGATTGTGCACTCTTCTTTAGAGTTGGCTAGCGTGCTTTGCAAGAAAGCAAAACAAATGGGTTTGATGGAGAAAGGATATGTATGGATCATCCCCAACGAGGTTGCTTCCCTTCTTGATTCGGTTAACTCTTCAGTTATCTCTACCATGCAAGGTGTTATTGGATTCAAAACACATTTTTTGGAAACTACCAAACCATATAGAAAGTTCGGGTTCAGATTTCGTAGAAGGTTTGCTCAAGAGTACCCTGAAGAAGAAGAGAACAACACTCCAAGTGTTTTCGCACTTCGAGCTTATGATGCAGCTATTGCTACTGCTAAGGTTACAAACAAGTCACAAGGAAAGTTCAACATGAAAGAATTCCTTGATGAAAATTTACATCAATCTTCAACCTTCACCATAATTAATGTGATAGGAAAAAGCTATAGAGAAATGGCAGTTTGGTCTCCAACACATGGTTTTTCCAAGAACTTTGTTGAACATGAGAAAATGGAGGTAAATAAATCTAACGGTTATGGTGGAGTTGTTTTGAGTAATATTTATTGGCCTGGAGATTTACACTCAGTTCCAAGGGGATGGACCAATAGTAATGAGGAAATGCCACTTAAAATAGGAGTACCTGCAAATGATGCCTTTGCTCAGTTTGTGAATGTCACCTATGGTGACAGCAAGCATGCAACTTCCATAACTGGTTTTTCAATCAATGTCTTCAAAGCAGCTATTAAGAATCTTCCATATCACTTGCACTATGATTTTGTTCCCTTCAATGGCTCCTATGATGAAATGGTTAATCAAGTTAACAATAAGACATTAGATGCTGCAGTTGGAGATATATCAATATTGGCATATAGATATCATTTAGTTGAGTTCTCACAACCATATATTGACTCTGGACTTAACATGGTGGTCGTTGAGAAGCCCAATAAATCAAAACAAACATGGATGTTTATGGATGCATTCACAAAAGAGATGTGGTTGATGATGGCAGCAATGCACGTTTTGGTTGGATTTGTCATTTGGTTGATTGAACGCGAAGAAAATGAAGAACTACAAGGGCTGGGGGCGATGCTTTGGTTTTTAGTCACTGTAATATTCCTTGCACATAGAGAACCAATAAGAAGACCATTGGCTCGAACCGTGTTGGCACCATGGTTATTTGTTATCCTAATTGTAACCAGTAGCTTCACAGCGAGTCTAACATCGATGATGACCGTATCGCAACTTGAACCATCAGTGGTTGATATTCAGACCCTTCAGAAGAGAAATGCTGCAGTTGGTTGTGATGAGAATTCATTTATTGTGAGGTATTTGATTGACATACTAAAATTCAAACCTGAGAACATTAGAAGAATAAATTCCATTAATGGTTACCCTGCAGCATTTAAGAATAATGAGATTGAAGCAGCTTTCTTTGTCGCCCCTCATGCCAAAGTCTTTCTCGCAAAGTACTCATGTGAAGGCTTCGTCCAAGCAGGGAGCACCTTTAGGCTTGGTGGCTTTGGTTTTGTGTTTCAAAGGGGCTCCTCTTTGGCTAGGGATATATCCGAGGCATTGCTAAGTGTTATAGAGAATGGAGAAACAGAGCAACTTGAAAAGGATATGCTGTCCAATTCACATTGCTCTCTTTCAGATAAAAAAGCAAAAGAAAGTTCACCATTAGGTTATCAGCCTTTCCTTGGCCTATTTTGCATTTGTGGCAGTATTGCTATTTTGGCACTATTGTATATCATGCTTTGTTTAACTTTAAAGAATGTTGAGAACTTGGTAAAATACATGAGAGGTGCATTGATTCAGTTATGGAGAATAAGGAGATGGATAACAACACATTGTGTTGGGATCTATTCTAAAGTACAGTCAAGGAGCATGAGAGGGGTTAATGTTGCCATAGAAGCAAGAAATTCAGCGGAAATAGTCATTGATAGTGAGCAAGTCCCTCGTGTAGCTGAAGTTGTTTGA 2511 0.3943 MGKQQKIAMEIAIRDFNRFSRTKLHLEVQNSRGNSAQTVVSAMDLAQKKQLLAIVGTITQSEASLATEINKATKNTPILSLSSFAPITELPSSPFPQLIQLGDDINIQMQCLAAIVGHFKWKKVTTIYEVNSRFSYDPGVLISLSNSLRHVGSEIVNQLAFPSLSLQSRIENELNQLKKKSNRVFLIVHSSLELASVLCKKAKQMGLMEKGYVWIIPNEVASLLDSVNSSVISTMQGVIGFKTHFLETTKPYRKFGFRFRRRFAQEYPEEEENNTPSVFALRAYDAAIATAKVTNKSQGKFNMKEFLDENLHQSSTFTIINVIGKSYREMAVWSPTHGFSKNFVEHEKMEVNKSNGYGGVVLSNIYWPGDLHSVPRGWTNSNEEMPLKIGVPANDAFAQFVNVTYGDSKHATSITGFSINVFKAAIKNLPYHLHYDFVPFNGSYDEMVNQVNNKTLDAAVGDISILAYRYHLVEFSQPYIDSGLNMVVVEKPNKSKQTWMFMDAFTKEMWLMMAAMHVLVGFVIWLIEREENEELQGLGAMLWFLVTVIFLAHREPIRRPLARTVLAPWLFVILIVTSSFTASLTSMMTVSQLEPSVVDIQTLQKRNAAVGCDENSFIVRYLIDILKFKPENIRRINSINGYPAAFKNNEIEAAFFVAPHAKVFLAKYSCEGFVQAGSTFRLGGFGFVFQRGSSLARDISEALLSVIENGETEQLEKDMLSNSHCSLSDKKAKESSPLGYQPFLGLFCICGSIAILALLYIMLCLTLKNVENLVKYMRGALIQLWRIRRWITTHCVGIYSKVQSRSMRGVNVAIEARNSAEIVIDSEQVPRVAEVV 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03093 836 Gene3D - 385 510 - -
Arst6g03093 836 Gene3D - 1 99 - -
Arst6g03093 836 SUPERFAMILY Periplasmic binding protein-like II 363 717 - -
Arst6g03093 836 FunFam Glutamate receptor 382 497 - -
Arst6g03093 836 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 764 IPR015683 -
Arst6g03093 836 CDD GluR_Plant 386 720 - -
Arst6g03093 836 Pfam Bacterial extracellular solute-binding proteins, family 3 411 717 IPR001638 -
Arst6g03093 836 SUPERFAMILY Periplasmic binding protein-like I 2 378 IPR028082 -
Arst6g03093 836 Gene3D - 280 384 - -
Arst6g03093 836 PIRSF IGluLR_plant 1 312 IPR017103 -
Arst6g03093 836 PIRSF IGluLR_plant 292 793 IPR017103 -
Arst6g03093 836 FunFam Glutamate receptor 498 631 - -
Arst6g03093 836 FunFam Glutamate receptor 108 273 - -
Arst6g03093 836 Pfam Receptor family ligand binding region 6 298 IPR001828 -
Arst6g03093 836 Gene3D - 593 683 - -
Arst6g03093 836 Gene3D - 684 716 - -
Arst6g03093 836 SMART GluR_14 388 722 IPR001320 GO:0015276|GO:0016020
Arst6g03093 836 Pfam Ligand-gated ion channel 718 751 IPR001320 GO:0015276|GO:0016020
Arst6g03093 836 Gene3D - 104 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03093 Arst-Chr6 96970176 96976401 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03093 8 786 Ion Channels AT2G29110 30.238 2.98e-116 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03093 - - aip:107605043 1586.24