Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03072 ATGGCTGGGCAATCAGATCCTGAGCTTTCACTGTTTTCAGCAGAGGAGCTTGAGTTCATTGCTGAGGATGAGATTGTGGACATTGTGCCCAATCTCAAGATGGGTCCTCTTAATTTCATCTCTGGAGATTTTGGCCCATTTATCCCACAGATTGTTGCCCAAGTACCGCTTTGGCTGGCTGTTGCATTAAAAAAGAGGGGCAAGTGCTCCATTTGCCCTCCTCAATGGATGTGTGTTGAGAAGTTGACTCAAGTTTTGGAAGCTGAGCGAAACTCGCAAGAAATGTCAGAGCAACTGCCATTTCACTATGTAGAAATTTCTAGACTTCTGTTTGACCATGCAAATGATGACATCTCGGATGCATATATGGTGAGATCTCTAATTGAGGACATCAGAGATGTACGATTTCATAAGGTTGAAACTGACCTGGAGGCATTCAATGGTCGCACAATTGCTGTTAAGATAAAAAATTTGTCTGCCATGGAAGTGAATATCGTCGACCGCAAGTTGTCCAAAATGCCCCAAGGAGGCAACTGCGAAGATAAGGTACTTACAGCTGGATCTGTGCTGCTGAATTCTTTGTACTAG 588 0.4388 MAGQSDPELSLFSAEELEFIAEDEIVDIVPNLKMGPLNFISGDFGPFIPQIVAQVPLWLAVALKKRGKCSICPPQWMCVEKLTQVLEAERNSQEMSEQLPFHYVEISRLLFDHANDDISDAYMVRSLIEDIRDVRFHKVETDLEAFNGRTIAVKIKNLSAMEVNIVDRKLSKMPQGGNCEDKVLTAGSVLLNSLY 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03072 195 FunFam DNA replication complex GINS protein PSF2 78 179 - -
Arst6g03072 195 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 7 171 IPR007257 GO:0005634|GO:0006260
Arst6g03072 195 Gene3D - 78 176 - -
Arst6g03072 195 CDD GINS_B_Psf2 13 74 - -
Arst6g03072 195 PIRSF GINS_PSF2 2 182 IPR007257 GO:0005634|GO:0006260
Arst6g03072 195 FunFam DNA replication complex GINS protein PSF2 12 77 - -
Arst6g03072 195 SUPERFAMILY GINS helical bundle-like 73 171 IPR036224 -
Arst6g03072 195 CDD GINS_A_psf2 66 166 - -
Arst6g03072 195 Pfam GINS complex protein 54 162 IPR021151 -
Arst6g03072 195 Gene3D - 12 77 - -
Arst6g03072 195 SUPERFAMILY PriA/YqbF domain 12 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03072 Arst-Chr6 96650852 96661757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03072 1 147 Core DNA Replication Machinery Family AT3G12530 70.068 1.61e-75 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03072 K10733 - gmx:100780528 294.664