LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst6g03058	ATGCCGGAGGAAACCACGTCGATCGACTATGTCATGGAGGCAGCCTCGGGGCCACACTTCTCCGGTCTCCGCCTCGACGGCCTCCTCTCCTCCCCGCCTCTCAACCAGCCCTTCGTTATTGGTGTTTCTGGAGGTACTGCTTCTGGGAAGACCACTGTCTGCGACATGATTATTCAGCAGCTTCACGATCACCGCGTTGTTCTTGTCAATCAGGATTCATTTTACCGTGGTTTGAGACCTGAAGAGTTGGAAAGAGTTCACGAGTACAATTTTGATCATCCAGATGCCTTTGACACCGAACAGCTATTAGAGTGCATGAGAAAGCTTATTGCTGGCCAGAGTGTGCAGGTGCCAATTTATGACTTTAAGAAGCACCAACGGTGTTCAGATAGTTTTCGGCAGGTCAATGCTTCTGATGTCATTATATTGGAGGGAATTCTTGTATTCCATGATCAGGATGTCCGGGATTTAATGAACATGAAGATCTTTGTTGACACAGATGCTGATGTGAGACTAGCTCGTAGGATTAGACGTGACACAGTGGAGCGAGGGAGGGACATAAACTCTGTTCTTGAACAGTACGCAAAGTTTGTTAAGCCTGCCTTTGATGATTTTGTTCTACCGTCAAAGAAGTATGCTGATGTGATCATTCCTCGGGGAGGTGATAATCATGTTGCCATTGATTTGATCGTGCAACATATCCGCACAAAGCTTGGTCAACATGATCTGTGCAAAATATATCCAAATGTTTATGTTATTCAATCAACATTCCAGATAAGGGGGATGCATACATTGATTCGTGACAAAGACATATCAAAGCATGATTTCGTATTTTATTCTGATCGGCTTATTCGTCTGGTTGTTGAGCATGGTCTTGGTCATCTCCCATTCACCGAAAAGCAAGTCGTTACTCCAACAGGATCTGTCTACACTGGTGTTGATTTCTGCAAGAAACTATGCGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAGAATGCACTTCGCGCATGTTGTAAGGGCATTAAAATAGGGAAAATTCTGATTCATCGGGATGGAGACGATGGACAACAGCTTATATATGAGAAGCTTCCCAAGGATATTTCAGAACGGCATGTCTTGCTTCTCGATCCTGTCCTTGCTACAGGTAACTCCGCCAACCAAGCAATTGAGTTACTCATTCAGAAAGGAGTTCCAGAGTCCCACATTATATTCCTGAATCTCATTTCTGCTCCTGAGGGGATCCATTGTGTGTGTAAACGGTTTCCCTCACTGAAAATTGTCACATCTGAGATTGATGCCGCCTTAAACGATGAGTTTCGGGTTATCCCTGGATTGGGGGAGTTTGGGGATCGCTACTTTGGTACAGATGATTGA	1377	0.4488	MPEETTSIDYVMEAASGPHFSGLRLDGLLSSPPLNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLRPEELERVHEYNFDHPDAFDTEQLLECMRKLIAGQSVQVPIYDFKKHQRCSDSFRQVNASDVIILEGILVFHDQDVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDDGQQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDAALNDEFRVIPGLGEFGDRYFGTDD	458

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst6g03058	458	PRINTS	Uridine kinase signature	37	54	-	-
	Arst6g03058	458	PRINTS	Uridine kinase signature	112	127	-	-
	Arst6g03058	458	PRINTS	Uridine kinase signature	183	194	-	-
	Arst6g03058	458	PRINTS	Uridine kinase signature	169	179	-	-
	Arst6g03058	458	PRINTS	Uridine kinase signature	205	218	-	-
	Arst6g03058	458	PRINTS	Uridine kinase signature	67	78	-	-
	Arst6g03058	458	NCBIfam	uridine kinase	38	237	IPR000764	-
	Arst6g03058	458	Pfam	Uracil phosphoribosyltransferase	255	456	-	-
	Arst6g03058	458	PANTHER	URIDINE KINASE	35	367	-	-
	Arst6g03058	458	Gene3D	-	34	240	IPR027417	-
	Arst6g03058	458	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	32	230	IPR027417	-
	Arst6g03058	458	FunFam	Uridine kinase	34	240	-	-
	Arst6g03058	458	CDD	PRTases_typeI	314	429	IPR000836	-
	Arst6g03058	458	Gene3D	-	241	456	IPR029057	-
	Arst6g03058	458	SUPERFAMILY	PRTase-like	240	457	IPR029057	-
	Arst6g03058	458	CDD	UMPK	39	237	IPR000764	-
	Arst6g03058	458	FunFam	Uridine kinase	241	456	-	-
	Arst6g03058	458	Pfam	Phosphoribulokinase / Uridine kinase family	39	225	IPR006083	GO:0005524\|GO:0016301

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst6g03058	Arst-Chr6	96498414	96505109	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst6g03058	1	458	PRT Gene Family	AT5G40870	85.507	0.0	834

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst6g03058	K00876		-	gmx:100780005	862.062