Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03057 ATGCCGGAGGAAACCACGTCGATCGACTATGTCATGGAGGCAGCCTCGGGGCCACACTTCTCCGGTCTCCGCCTCGACGGCCTCCTCTCCTCCCCGCCTCTCAACCAGCCCTTCGTTATTGGTGTTTCTGGAGGTACTGCTTCTGGGAAGACCACTGTCTGCGACATGATTATTCAGCAGCTTCACGATCACCGCGTTGTTCTTGTCAATCAGGATTCATTTTACCGTGGTTTGAGACCTGAAGAGTTGGAAAGAGTTCACGAGTACAATTTTGATCATCCAGATGCCTTTGACACCGAACAGCTATTAGAGTGCATGAGAAAGCTTATTGCTGGCCAGAGTGTGCAGGTGCCAATTTATGACTTTAAGAAGCACCAACGGTGTTCAGATAGTTTTCGGCAGGTCAATGCTTCTGATGTCATTATATTGGAGGGAATTCTTGTATTCCATGATCAGGATGTCCGGGATTTAATGAACATGAAGATCTTTGTTGACACAGATGCTGATGTGAGACTAGCTCGTAGGATTAGACGTGACACAGTGGAGCGAGGGAGGGACATAAACTCTGTTCTTGAACAGTACGCAAAGTTTGTTAAGCCTGCCTTTGATGATTTTGTTCTACCGTCAAAGAAGTATGCTGATGTGATCATTCCTCGGGGAGGTGATAATCATGTTGCCATTGATTTGATCGTGCAACATATCCGCACAAAGCTTGGTCAACATGATCTGTGCAAAATATATCCAAATGTTTATGTTATTCAATCAACATTCCAGATAAGGGGGATGCATACATTGATTCGTGACAAAGACATATCAAAGCATGATTTCGTATTTTATTCTGATCGGCTTATTCGTCTGGTTGTTGAGCATGGTCTTGGTCATCTCCCATTCACCGAAAAGCAAGTCGTTACTCCAACAGGATCTGTCTACACTGGTGTTGATTTCTGCAAGAAACTATGCGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAGAATGCACTTCGCGCATGTTGTAAGGGCATTAAAATAGGGAAAATTCTGATTCATCGGGATGGAGACGATGGACAACAGGTATATAAAACTTTCAGAACAGAAGTGACTTATAGGAGAGACCTCATCTATAGGATGGATGTTGTGTTTAATGGTAGAATCCTTTGCTTTTTTGAGCAGCTTATATATGAGAAGCTTCCCAAGGATATTTCAGAACGGCATGTCTTGCTTCTCGATCCTGTCCTTGCTACAGGTAACTCCGCCAACCAAGCAATTGAGTTACTCATTCAGAAAGGAGTTCCAGAGTCCCACATTATATTCCTGAATCTCATTTCTGCTCCTGAGGGGATCCATTGTGTGTGTAAACGGTTTCCCTCACTGAAAATTGTCACATCTGAGATTGATGCCGCCTTAAACGATGAGTTTCGGGTTATCCCTGGATTGGGGGAGTTTGGGGATCGCTACTTTGGTACAGATGATTGA 1476 0.4424 MPEETTSIDYVMEAASGPHFSGLRLDGLLSSPPLNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLRPEELERVHEYNFDHPDAFDTEQLLECMRKLIAGQSVQVPIYDFKKHQRCSDSFRQVNASDVIILEGILVFHDQDVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDDGQQVYKTFRTEVTYRRDLIYRMDVVFNGRILCFFEQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDAALNDEFRVIPGLGEFGDRYFGTDD 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03057 491 FunFam Uridine kinase 34 240 - -
Arst6g03057 491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 230 IPR027417 -
Arst6g03057 491 CDD PRTases_typeI 314 462 IPR000836 -
Arst6g03057 491 SUPERFAMILY PRTase-like 251 488 IPR029057 -
Arst6g03057 491 Pfam Phosphoribulokinase / Uridine kinase family 39 225 IPR006083 GO:0005524|GO:0016301
Arst6g03057 491 PRINTS Uridine kinase signature 112 127 - -
Arst6g03057 491 PRINTS Uridine kinase signature 37 54 - -
Arst6g03057 491 PRINTS Uridine kinase signature 169 179 - -
Arst6g03057 491 PRINTS Uridine kinase signature 205 218 - -
Arst6g03057 491 PRINTS Uridine kinase signature 183 194 - -
Arst6g03057 491 PRINTS Uridine kinase signature 67 78 - -
Arst6g03057 491 Gene3D - 241 489 IPR029057 -
Arst6g03057 491 Gene3D - 34 240 IPR027417 -
Arst6g03057 491 CDD UMPK 39 237 IPR000764 -
Arst6g03057 491 Pfam Uracil phosphoribosyltransferase 255 489 - -
Arst6g03057 491 NCBIfam uridine kinase 38 237 IPR000764 -
Arst6g03057 491 PANTHER URIDINE KINASE 35 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03057 Arst-Chr6 96498412 96505109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03057 1 491 PRT Gene Family AT5G40870 80.039 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03057 K00876 - gmx:100780005 845.114