Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03056 ATGCCTCCAAAGAAGAAGAAGAACAACACTTCTTCTTCTTCTTCTGCGTCCAAGAAGCATAACCCTCAACCTTCCAAGTTCGGCATCCAGCACTTCTTTGATCGCCACACACAGAACAACGCTCTCCTCGCCTCCCAAAAGCTCCAAACTAACAATGCTTCCGATTCCGCCGCTAAACCAGTTTCTGACCCTCTCCCTGCCCGAACCAGAGACCCGATTTGCAGCACCGTTGTGCAGGTGACTCCCCAACCATCGCCGCAAAAACCTAGCGACGACAAGGGTAATACAAATTATATTAGTAATAATGATAATAGAAGTAACAATGGACCGTCCCAGAATACTCCTACTGAGAAGTTGGTGGTGCCGGTTGATAATGTGATGGAAGATATTGTGTCTGAGGTGTCCCCAGATATTTCTAAAGCTATGCCGCTTAAGCGCTTCAAATTCTCACCTGGAATGTTTATAAAGCAGACTCAAGATTATGGGGTTGATGAGGTCACATGGAAGATATCTCCAGTGAACGAAAGACTCCAAGCTGTTTCTAAACATGTGCCAAATGTCATTAAAGCGTTGGCCGACTCTTCAAGACTCAACTTATTGCCATTTCGTAGCTGCTCAGAAGATAAGACTTTTCGGGATAAAGATGACAAGGTTGACGAATTGCTTACTTCACCAACTCCCAAGGCTTCTGCAAAAGCTCTGCCTTCAATGAGTAAATTAGGCTTGAAAAGGATAAATCCAGAACAAAGTGTGGATTTTGACACCAATCCAATTACTCTGAGCTACTCTGGAGTATCTAGCAGACAGAGTCCCTTCAGGACTCCACCCTCTTTGTCTCATTGTCCCGATAAGGTGCATCCTATTAATGACATTCAATGCACTGGACCATCTGATCAACTTTATCTCAGACAGCACAAAAAGACTTTGCTTGAACTGTTAGATCAAGTTGAAGATGCCATTGCTGTTGATGACGCTACTGTTTGTAACAAGGGAACTGATTCTTTAAAATGTTGTGACGGCATTGCTGATGAGCTCCCTGTTAGAGCCAACCATGCTGATGAAAGAACAAGATCACATAGATCTAAAGAGGATATGGTTGCTGACTCTAGTTATCTGGTTTTGCAGGTGTCTGAAAATTCTAGGTCTGCTGATTCATCTGCTGCTGATGCTCGATCCCCATACAAGGTGCTTCGCTTACTAAATGAGCAAACTGGAGAGGAGCGGGTTGTAAACTTGAGGGATGAGTGGTTTTTCAGTGTAATTGCACCTGGAGATACTGTAAACATAATCGGTCAATTTGATGAAGGAGGAAGTTGTGATATAGGCCATGAAAATAATTTCTTGATTGTGCACCCAGACATTCTGCTGTCTGGAACAAGGGTTGCTGGCAGTTTTGGTTGCCTTAGGAGAACTGTCTTAGATGAGAGGCTAAAATGCAATGAGTACTCTACTGCAGCATTGACTGGAACCTTGCTTCACCAAATTTTTCAGGCTGGGCTCACAGAAGACAATCCATCTATTGACTTCTTGGAAGGTTACACAGAAGTGGTATTACTTAGGAACATTGAGAGTCTGTATGCTTGTGGAGTAAATGAAAGTGATGTTCGGAAAACTTTGATTGATGCTGTCCCGAGAATATTGAGTTGGATTTTACGGTTCACAAATAAGGAGGAAAATGAAGATCCTAATGTTTGTTTTGGATTTCACAATAGGCCTAACAAAGTTGCCATATCTGAGGTAATTGATATTGAAGAGATGGCATGGGCTCCTAAATATGGTTTGAAAGGGATGATTGATGCTTCAGTCAGAGTGACAGTACAATCAGTAAAAGATGAACTGGAGGAGAAGATTATGCCAGTAGAGTTCAAAACCGGGAAATCACCAGCTGGCCAGTCATCAGCAGAACACAATGCTCAAGTAATCTTATATACTCTTCTGATGTCTGAAAGGTATCAAAACACCATTGATTCTGGTCTTCTATATTATCTCCAATCAGATCAGACACAGGGTATTGTGGCTCAAAGATCTGACTTAGTTGGCCTAATAATGCGACGGAACGAGCTAGCAAGTGATATTCTTAAGGCATTAACCTCGCAACAACTTCCAGCAATGTTAAAGAGTCCTGGCATTTGCAAAGGTTGTCGCCATCTTAATGTTTGTAGCATTTATCACAAGTTACATGGTGGAAGCACAAAAAGCAGTGGATTGGAAGATGTATTTGATTCTCTTACTGACCACCTTACATCTTCCCATTCCAAGTTCCTCTGCCATTGGGATCGGCTGATTGACTTGGAAGCCAAGGAGACTGAGCTTTTAAGGAAAGAGATGTGGCGATCACATAGTTTAAAAGCTCCAAACTGTGGTAGCCTTTCTTCTATTGTTCTCGATGCTTCATATGGAATTCCTCATCAGAAATCTGTCAAAGATAATCGCTTTGTTTATCGTTTTGTAAGACAAGATAATTGTCCCTCTGAAGTTTCTGATGGTGATCATTGTAGTACCTATTCAACAAATTTAGATCTTACACTTGCAAGCGGAGACTATGTGATATTGAGTAATGACTCTAGTGGGCAAATTATTGCAAAAGGGGTGATCTCTGATATTAGCCAGATTCATGTATCTGTTTCCTTTTCAAAACGCTTACGAATTCCTGGAAGATGTTCCACTACACATGATCTCCTTCAACAGGTTTGGAGAATTGACAAGGATGAATTTGTGACTTCATTTGCATCTATGAGGTTTAATCTTGCACAACTTTTTCTACAAAATGTTCGGAGTACTCATCTGCGGAGGATGATTGTTGATCTTGAGGCTCCTAGGTTTGACTGTGAATCTATAGTCAGTCAGGATCCAGCAATATCATATGTTCGGTCGAAGAAATCTTTGAATGATGATCAATGTAAAGCAATTCTCAAGATACTTGCAGCAAAAGATTATGCGCTTATATTAGGAATGCCTGGAACAGGAAAGACTTCTACGTTGGTTCATGCTGTGAAAGCCTTGCTGGAAAGGGGCTCTTCCATTTTGCTGACAGCCTATACAAACTCTGCAGTTGATAATTTACTCATGAAATTAAAAGCACAGGACATTGATTTTGTTCGGATTGGAAGACCAGAAGCAGTGCATGAGGTGGTCAGAGGACACTGCCTTTCAGCAACAAGTATACAAAATGTTGAAGATATCAAAATAAGGTTAGGTCAAGTCAGAGTTGTTGCAGTTACTTGTCTTGGCATTTCCAGTCCCTTGCTTGCCAACATGAGATTTGATGTATGCATTATGGATGAAGCTGGACAGACAACCTTACCTGTGTCCTTGGGCCCCCTAGCATTTGCTTCAGTGTTTGTACTTGTTGGGGATCATTATCAATTGCCTCCACTTGTCCAGAGCATAGAGGCCCGAGAGAATGGCATGGGGATAAGTTTGTTCTGTAGACTCTCCGAAACACATCCAGAGGCAATTGCGGAATTACGGAGCCAGTACCGGATGCGTCAAGGCATTATGGACTTGTCAAATGCCTTGATATATGGTGACAGGTTGAGGTGTGGTTCATCTGAAATAGCTAATGCAACACTTGAGTTTTCTAATCTAAACTGTGGCTTGACTTGGCTAGAAGATGTTTTAAATCCAAGCAGGCCAGTGATTTTTATTGATACTGACATGTTACCCGCTTTGGAGGTAAGAGATCAGAAGACTGTCAATAATCCAGTTGAAGCTCACATAATTGCCGAGGTTGCAACGGAATTGGTTAGAAATGGAATTGTAGGAGAGCAGATTGGTGTTATTACCCCCTATAATTCACAGGCAAACCTCATCCGGAAAGCAGCTTCCGAGACTACCATGGAGATACATACCATTGACAAATATCAGGGTAGAGATAAGGATTGCATATTAGTCTCTTTCGTAAGATCTAGTGAAAACCCAACGAACCTTGCTGCTTCTCTTCTCGGAGACTGGCACAGGATAAATGTGGCACTCACTCGCGCTAGGAAAAAGTTGATCATGGTGGGGTCTCGTAGAACTCTTTCAAAGGTTCTGCTACTGAAACTTCTCATTAAGAACGTTGAGGAACAATGTGGAATTATAAGTGTTTCGAAGAAGGATATCATTCCAAAAGGTCAGCTCCGAAAATGTTCTCAAATGGGTTGA 4146 0.4185 MPPKKKKNNTSSSSSASKKHNPQPSKFGIQHFFDRHTQNNALLASQKLQTNNASDSAAKPVSDPLPARTRDPICSTVVQVTPQPSPQKPSDDKGNTNYISNNDNRSNNGPSQNTPTEKLVVPVDNVMEDIVSEVSPDISKAMPLKRFKFSPGMFIKQTQDYGVDEVTWKISPVNERLQAVSKHVPNVIKALADSSRLNLLPFRSCSEDKTFRDKDDKVDELLTSPTPKASAKALPSMSKLGLKRINPEQSVDFDTNPITLSYSGVSSRQSPFRTPPSLSHCPDKVHPINDIQCTGPSDQLYLRQHKKTLLELLDQVEDAIAVDDATVCNKGTDSLKCCDGIADELPVRANHADERTRSHRSKEDMVADSSYLVLQVSENSRSADSSAADARSPYKVLRLLNEQTGEERVVNLRDEWFFSVIAPGDTVNIIGQFDEGGSCDIGHENNFLIVHPDILLSGTRVAGSFGCLRRTVLDERLKCNEYSTAALTGTLLHQIFQAGLTEDNPSIDFLEGYTEVVLLRNIESLYACGVNESDVRKTLIDAVPRILSWILRFTNKEENEDPNVCFGFHNRPNKVAISEVIDIEEMAWAPKYGLKGMIDASVRVTVQSVKDELEEKIMPVEFKTGKSPAGQSSAEHNAQVILYTLLMSERYQNTIDSGLLYYLQSDQTQGIVAQRSDLVGLIMRRNELASDILKALTSQQLPAMLKSPGICKGCRHLNVCSIYHKLHGGSTKSSGLEDVFDSLTDHLTSSHSKFLCHWDRLIDLEAKETELLRKEMWRSHSLKAPNCGSLSSIVLDASYGIPHQKSVKDNRFVYRFVRQDNCPSEVSDGDHCSTYSTNLDLTLASGDYVILSNDSSGQIIAKGVISDISQIHVSVSFSKRLRIPGRCSTTHDLLQQVWRIDKDEFVTSFASMRFNLAQLFLQNVRSTHLRRMIVDLEAPRFDCESIVSQDPAISYVRSKKSLNDDQCKAILKILAAKDYALILGMPGTGKTSTLVHAVKALLERGSSILLTAYTNSAVDNLLMKLKAQDIDFVRIGRPEAVHEVVRGHCLSATSIQNVEDIKIRLGQVRVVAVTCLGISSPLLANMRFDVCIMDEAGQTTLPVSLGPLAFASVFVLVGDHYQLPPLVQSIEARENGMGISLFCRLSETHPEAIAELRSQYRMRQGIMDLSNALIYGDRLRCGSSEIANATLEFSNLNCGLTWLEDVLNPSRPVIFIDTDMLPALEVRDQKTVNNPVEAHIIAEVATELVRNGIVGEQIGVITPYNSQANLIRKAASETTMEIHTIDKYQGRDKDCILVSFVRSSENPTNLAASLLGDWHRINVALTRARKKLIMVGSRRTLSKVLLLKLLIKNVEEQCGIISVSKKDIIPKGQLRKCSQMG 1381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03056 1381 Gene3D - 890 1159 IPR027417 -
Arst6g03056 1381 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 960 1345 IPR027417 -
Arst6g03056 1381 Pfam Domain of unknown function DUF83 607 721 IPR022765 -
Arst6g03056 1381 Gene3D - 457 721 IPR011604 -
Arst6g03056 1381 MobiDBLite consensus disorder prediction 1 116 - -
Arst6g03056 1381 FunFam DNA replication helicase Dna2 896 1159 - -
Arst6g03056 1381 CDD SF1_C_Upf1 1162 1340 IPR047187 -
Arst6g03056 1381 FunFam DNA replication helicase Dna2 567 721 - -
Arst6g03056 1381 Gene3D - 1160 1367 IPR027417 -
Arst6g03056 1381 Pfam AAA domain 1065 1129 IPR041677 GO:0004386
Arst6g03056 1381 Pfam AAA domain 962 1052 IPR041677 GO:0004386
Arst6g03056 1381 Pfam DNA replication factor Dna2 402 604 IPR014808 -
Arst6g03056 1381 CDD DEXXQc_DNA2 961 1161 IPR026851 GO:0017116
Arst6g03056 1381 MobiDBLite consensus disorder prediction 1 24 - -
Arst6g03056 1381 FunFam DNA replication helicase 1160 1372 - -
Arst6g03056 1381 Pfam AAA domain 1139 1338 IPR041679 -
Arst6g03056 1381 PANTHER DNA2/NAM7 HELICASE FAMILY 108 1356 IPR045055 -
Arst6g03056 1381 MobiDBLite consensus disorder prediction 32 58 - -
Arst6g03056 1381 MobiDBLite consensus disorder prediction 74 116 - -
Arst6g03056 1381 CDD DNA2_N-like 457 692 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03056 Arst-Chr6 96467243 96484930 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03056 1 1103 Core DNA Replication Machinery Family AT1G08840 52.716 0.0 1068
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03056 K10742 - gmx:100799415 1719.13