Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03055 ATGGCGGGAGAGAACACTATGAAGCAAAGGCCTCTTCCTGTTCCGTCTTCTTCTCCGTCAATGAGAGCGAAAATGGAGGAAACAACAAAGGAAAAATGCTGGAGAATGGAAGTCGACGAGAATCTGAAGCGCCTCCAGTCCCTTCAGTTCGGCGTCGACCACGCCCTCACCACCCAGGACTTTTCCTCCGCCTATGTCCTCGGCCTCCGCCTCCTCGGCTTCCTCGACTCCCACTCCCATTCCGACGTCGACGAAGCCTTCATCCACCCTATTCGCCGCCAAACCCTCTCCACTCTTGCCTCCGCTCGCCGTTCCCTCACTCCTGATTCCGATCGTCTAGCTTTTGAACAAGCAAAGAAGCCTCAGGGACGCGTTTTTGCCACATCAGGTGAAATTGACATTGACAAGATCCGCAAGTCGAAGTACTTTCGAGCTCTTCTCGCGCAATCTAATGAAATTGACGAGAATCAGTTGGGTGAACAAATTGGGAAGCAAGACGGATCGTGCGAGAAGCCGTCAAAGGAAATGCTGCAAGCGAAGCTGACGTCAGCGTATGGGAAGAGTGCATTGAGGAATGATAATGCTACGAAGAACTTCTTCAATTTGAAGGATAATTGCTCTGAGGAATGCGTTGTTGTTGAGAGGCCTCAATTTCAGAACAGCCATACAAAGGGTTCTACTATTTCTTCTTTCTTGCAGGTTGAAGAGGAAGAAAGAATGAACTCGTTTGGGAAGAAACGTGTGCATATGGAAATTAATAATAGTCCCAAAGTTGGTTATTCGAGGTCACCTTCAAGCAAAGAGGATGTTAACCCTGAAGTTTCTGGCAATGGATTTGTAACTGCTAGAGCCAAATTGGAAATGGAAGCAAGGCAAAAGAGAGGGGCAGTTGGTTCACCCAATGCACCTGTATCCCCACAAGGCGATAATAATCCTTCCAATAGGTTATATAGTGGGAGATCGTATGGCATTTCACGACGTGGCTTCCGTGGTAATTTTGTCCCACCCATTAAATCCAATGGGAGTAATGTTGGAAATGTGACTTCACGAATTGCTGGAAAGGGAGATGATTCTCTAGATGATTCTACCAAAAGATGTTTGGAAATGCTGTGTGGGCCTGATGGTGAGCTTCCTGAGAAATTGAGGAATTTGGAACCTCGCCTCATCGAGCATGTTAGTAATGAGATTATGGATAGAGATCCTAATGTCCGTTGGGATGACATTGCTGGGTTGGAGCATGCCAAGAAATGTGTAACTGAAATGGTTATATGGCCTCTGCTACGTCCAGACATATTTAAGGGATGCCGGTCACCTGGTAGGGGTTTGCTCTTATTTGGTCCACCGGGAACTGGTAAAACGATGATAGGCAAAGCAATAGCAGGGGAGGCAAAGGCAACCTTCTTTTACATATCTGCAAGTTCGTTGACAAGCAAGTGGATTGGTGAAGGCGAAAAGCTAGTAAGAGCCCTTTTTGGAGTTGCCAGTTGTCGTCAGCCAGCAGTAATTTTTGTTGATGAGATAGATTCACTCCTCTCTCAGCGCAAGTCAGATGGTGAGCATGAATCAAGTAGAAGGCTTAAGACACAATTTCTCATAGAAATGGAAGGCTTTGATAGTGGCAGCGAACAGATTCTACTTATAGGGGCAACAAATCGTCCCCAAGAGCTTGATGAAGCAGCAAGAAGGAGACTTACCAAAAGACTATATATCCCCCTACCCTCCTCAGAAGCTAGAGCTTGGATTATACGTAACCTACTAGAGAAAGATGGATTATTCAGTCTATCAAGGGAGGAAATAGATATCATATGTAACATAACCGAAGGTTATTCAGGATCTGACATGAAAAACTTAGTGAAGGATGCATCTATGGGTCCCCTAAGAGAGGCCCTAAAACAGGGTATAGAAATTTCAAAGTTGAAGAAGGAGGATATGAGGCCAGTAACCCTTCAGGACTTCGAGAATGCCCTAAAAGAAGTGAGGCCTTCTGTTTCCACTAACGAACTTGGCACCTACGATGAATGGAACAACCAGTTTGGAAGCCTATCACGGTAG 2052 0.4586 MAGENTMKQRPLPVPSSSPSMRAKMEETTKEKCWRMEVDENLKRLQSLQFGVDHALTTQDFSSAYVLGLRLLGFLDSHSHSDVDEAFIHPIRRQTLSTLASARRSLTPDSDRLAFEQAKKPQGRVFATSGEIDIDKIRKSKYFRALLAQSNEIDENQLGEQIGKQDGSCEKPSKEMLQAKLTSAYGKSALRNDNATKNFFNLKDNCSEECVVVERPQFQNSHTKGSTISSFLQVEEEERMNSFGKKRVHMEINNSPKVGYSRSPSSKEDVNPEVSGNGFVTARAKLEMEARQKRGAVGSPNAPVSPQGDNNPSNRLYSGRSYGISRRGFRGNFVPPIKSNGSNVGNVTSRIAGKGDDSLDDSTKRCLEMLCGPDGELPEKLRNLEPRLIEHVSNEIMDRDPNVRWDDIAGLEHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIIRNLLEKDGLFSLSREEIDIICNITEGYSGSDMKNLVKDASMGPLREALKQGIEISKLKKEDMRPVTLQDFENALKEVRPSVSTNELGTYDEWNNQFGSLSR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03055 683 FunFam Fidgetin like 1 573 659 - -
Arst6g03055 683 Pfam ATPase family associated with various cellular activities (AAA) 442 572 IPR003959 GO:0005524|GO:0016887
Arst6g03055 683 PANTHER AAA DOMAIN-CONTAINING 236 680 - -
Arst6g03055 683 Pfam Vps4 C terminal oligomerisation domain 645 679 IPR015415 -
Arst6g03055 683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 401 678 IPR027417 -
Arst6g03055 683 MobiDBLite consensus disorder prediction 1 24 - -
Arst6g03055 683 MobiDBLite consensus disorder prediction 254 276 - -
Arst6g03055 683 ProSitePatterns AAA-protein family signature. 544 563 IPR003960 GO:0005524|GO:0016887
Arst6g03055 683 MobiDBLite consensus disorder prediction 290 322 - -
Arst6g03055 683 MobiDBLite consensus disorder prediction 256 272 - -
Arst6g03055 683 Gene3D - 573 659 - -
Arst6g03055 683 Gene3D - 401 675 IPR027417 -
Arst6g03055 683 FunFam Fidgetin-like 1 401 583 - -
Arst6g03055 683 SMART AAA_5 438 574 IPR003593 GO:0016887
Arst6g03055 683 MobiDBLite consensus disorder prediction 303 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03055 Arst-Chr6 96442827 96448293 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03055 357 681 Calmodulin-binding Proteins AT3G56690 31.563 7.60e-42 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g03055 K22766 - gmx:100776024 1032.71