LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst6g03035	ATGAAGAAGATATGGGTTGTGTTAGTGGCTATGTTCATGATTAGTGTGTCTAAAGGAGAAGGGAAATTAGTGGAGAATTTTTATGGTCAAACTTGTCCAAACGTTGAATCAATTGTGACACAGGCAGTTACCACTAAGTTTCATCAAACTATCAAGATACTTCCCAGGTTCCAACCTAGACTACTAGATTTAAAACTCGTTGACTATAAGAGTTGGTGGCAAATTAAAATTGAATTGATTATTTATGCACAGGGTTGTGATGCGTCAGTGATGATAGCGTCGCCAAATGGGGATGCAGAAAAGGATGCCTCAGAAAATCTCTCACTGGCAGGAGATGGCTTTGATACAGTTATTAAGGCCAAAGCCGCCGTTGAAGCCTCATGTCCTGCCGTTGTTTCTTGCGCAGACATTTTGGCACTCGCTACCAGAGATGTTATAGCCTTGCTTGGTGGGCCTTCATACAGAGTAGAACTTGGACGCAGAGATGGACTTGTTTCCAAGGCATCAAGTGTGGACTCTAACCTTCCGAAAGCAAGTTTCAACCTTAACCAACTAAACAAAATGTTCTCAAAACACAACCTCACCCAAACCGACATGATTGCGCTCTCAGGAGCACACACCGTTGGCTTCTCACACTGCAACCAATTCTCAAACCGTTTGTACTCCTTCCAATCCTCGTCCCACGTGGACCCCACCCTTGATCCAAACTATGCACAACAACTTAAATCAGATTGCCCTCAACAAAGCGTTAACCCAAGCGTCGTCATAGCTCTGGACCCCCAAACATCCTTCACTTTCGACAACTTGTATTACAAAAACTTGGTTTCCGGCCAAGGGCTGTTGGAATCAGACCAGACTCTGTTTACGGACCCGGCGTCGCAGGCTACGGTTGTTGAGTTTGCGAATAACCAGAATGAGTTCTTTGTGGCCTTTGTTGCGGCCATGAGGAAGCTTGGAAGGGTGGGTGTCAAGACTGGTAATGATGGAGAGATTAGAAGAGACTGTACAACATTCAATTCATGA	1023	0.4477	MKKIWVVLVAMFMISVSKGEGKLVENFYGQTCPNVESIVTQAVTTKFHQTIKILPRFQPRLLDLKLVDYKSWWQIKIELIIYAQGCDASVMIASPNGDAEKDASENLSLAGDGFDTVIKAKAAVEASCPAVVSCADILALATRDVIALLGGPSYRVELGRRDGLVSKASSVDSNLPKASFNLNQLNKMFSKHNLTQTDMIALSGAHTVGFSHCNQFSNRLYSFQSSSHVDPTLDPNYAQQLKSDCPQQSVNPSVVIALDPQTSFTFDNLYYKNLVSGQGLLESDQTLFTDPASQATVVEFANNQNEFFVAFVAAMRKLGRVGVKTGNDGEIRRDCTTFNS	340

Annotation information

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Arst6g03035	340	ProSitePatterns	Peroxidases proximal heme-ligand signature.	198	208	IPR019793	-
Arst6g03035	340	SUPERFAMILY	Heme-dependent peroxidases	23	339	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
Arst6g03035	340	Gene3D	Peroxidase, domain 2	176	318	-	-
Arst6g03035	340	CDD	secretory_peroxidase	22	335	IPR033905	GO:0004601\|GO:0042744
Arst6g03035	340	Gene3D	-	26	339	-	-
Arst6g03035	340	PRINTS	Haem peroxidase superfamily signature	150	162	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Arst6g03035	340	PRINTS	Haem peroxidase superfamily signature	259	274	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Arst6g03035	340	PRINTS	Haem peroxidase superfamily signature	132	149	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Arst6g03035	340	PRINTS	Haem peroxidase superfamily signature	198	213	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Arst6g03035	340	ProSiteProfiles	Plant heme peroxidase family profile.	22	339	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
Arst6g03035	340	FunFam	Peroxidase	176	318	-	-
Arst6g03035	340	PRINTS	Plant peroxidase signature	197	209	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Arst6g03035	340	PRINTS	Plant peroxidase signature	273	290	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Arst6g03035	340	PRINTS	Plant peroxidase signature	131	141	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Arst6g03035	340	PRINTS	Plant peroxidase signature	32	51	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Arst6g03035	340	PRINTS	Plant peroxidase signature	313	326	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Arst6g03035	340	PRINTS	Plant peroxidase signature	150	165	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Arst6g03035	340	PRINTS	Plant peroxidase signature	257	272	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Arst6g03035	340	PRINTS	Plant peroxidase signature	112	125	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Arst6g03035	340	PANTHER	-	2	339	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
Arst6g03035	340	Pfam	Peroxidase	59	303	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst6g03035	Arst-Chr6	95980667	95983568	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst6g03035	4	339	Peroxidase	AT5G14130	55.952	1.65e-128	370

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst6g03035	K00430		-	gmx:100812082	441.425

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Arst6g03035	6	95980667	95983568	Arst6g03035	6	95980667	95983568	ECH