Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g03012 ATGGATAATAATTATTCCATGTTGTTCCCATGTCCTCCTTCTTCTTCTTCTACTTCCTCGTACCAGATTTCAATTTCTAACAATAATAACGACAATAGTAATCAGCAGCATGGTTTCATTACTGGTTTGAATAATAATAATAACGGTCAAAGCTCCAATAATAGTGCATTTCTGGATTTGAAGTTTCATGAGCAGCAGCTGAAGAGATCAGAAGAAGATCAAGAAGAAGAAGAAGAAGAGAGGATTAATGTGAGTGATCATCATCAGTTAGGGGGTGGTTCTTCATCATCATCGAACAAGAAGAAAGGAGAGAAGAAAATAAGAAAACCGAGATACGCGTTTCAAACCAGGAGCCAAGTTGATATTCTTGATGATGGTTATCGATGGAGGAAATATGGCCAAAAGGCTGTTAAAAACAACAAATTCCCAAGGAGCTACTATAGGTGCACACATCAAGGGTGCAACGTGAAGAAGCAAGTGCAACGTCTTACAAAAGATGAGGGTGTAGTGGTGACCACCTATGAAGGAGTGCACACTCACCCAATTGAGAAGACAACCGACAACTTTGAACACATTTTGAGTCAGATGCAAATATACACCCCCTTTTGA 609 0.3924 MDNNYSMLFPCPPSSSSTSSYQISISNNNNDNSNQQHGFITGLNNNNNGQSSNNSAFLDLKFHEQQLKRSEEDQEEEEEERINVSDHHQLGGGSSSSSNKKKGEKKIRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g03012 202 FunFam WRKY transcription factor 57 109 183 - -
Arst6g03012 202 Gene3D WRKY domain 108 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst6g03012 202 Pfam WRKY DNA -binding domain 124 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst6g03012 202 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 24 185 IPR044810 GO:0003700
Arst6g03012 202 SUPERFAMILY WRKY DNA-binding domain 115 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Arst6g03012 202 ProSiteProfiles WRKY domain profile. 118 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Arst6g03012 202 MobiDBLite consensus disorder prediction 67 112 - -
Arst6g03012 202 MobiDBLite consensus disorder prediction 1 55 - -
Arst6g03012 202 Coils Coil 60 80 - -
Arst6g03012 202 SMART WRKY_cls 123 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g03012 Arst-Chr6 95414731 95418067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g03012 111 202 WRKY Transcription Factor Family AT5G13080 88.043 5.69e-59 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Arst6g03012 WRKY 2e-26 CL0274