Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02981 ATGGGTCATTGCCCATGTTTTGGGTTTAGAAAGAAGGCCAATAGAGGAGAGAAGCTCAAGTTTCAACAAGAGGAACATAGCAAAGTTATCGAGAAGAAACTCCATTCTCCACACAATGTTTCTGCTGAAAAACCTTCAGGACTATTAACACCTGAGGCAACTTTTGCAACAAAGGAGATTGACCATTCTAATAACAAGGCTCATATATTTACCTTCCGAGAGCTTGCAACAGCAACAAAAAATTTTAGGGATGAAACATTTATTGGGCAAGGTGGATTTGGAACTGTTTACAAAGGAAAGCTAGGTAAACTAAATCAGGTTGTAGCTGTAAAACGACTTGATACAAGTGGTGCCCAAGGGGAGAAAGAATTCTTAGTGGAGGTTCTGATGTTGTCTCTTTTACGTCATCCAAACCTTGTTAATTTGATTGGTTACTGTGCTGAAGGTGATCAACGTCTTCTTGTCTACGATTACATGCCTATGGGATCCTTAGAATCTCGTCTCCATGATCTGCCACATGATAAAGAAGCTCTTGATTGGAATACAAGAATGAAGATAGCAACAGGGGCAGCAAAAGGAATAAATTATCTACACAATGAAGCAAAACCATCGGTTATATACAGGGATCTAAAATCATCAAACATACTTTTAGACAAGGGGTTTGTTCCAAAACTTTCTGATTTTGGGCTTGCAAAATTTGGGCCAACCGGAGACCAATCATATGTTGACACGAGGGTGATGGGAACACATGGTTATTGTGCCCCTGAATATGCCACAAGTGGGAAATTAACCAGGAGATCTGACATATATAGTTTTGGGGTTTTGTTGTTAGAGCTTATAACTGGACGCAGAGCTTATGATGAGAATCGTGGCCATGACAAGCATCTTGTTGATTGGAGAAGAGCCACGTCAACGGCCGGACGCGGCGGACATAGTGATCGCTCTCGATTTCTTGTCTTCCAAGCAATACGTTCAGAGAGTACCTATCGATTTTGA 996 0.4106 MGHCPCFGFRKKANRGEKLKFQQEEHSKVIEKKLHSPHNVSAEKPSGLLTPEATFATKEIDHSNNKAHIFTFRELATATKNFRDETFIGQGGFGTVYKGKLGKLNQVVAVKRLDTSGAQGEKEFLVEVLMLSLLRHPNLVNLIGYCAEGDQRLLVYDYMPMGSLESRLHDLPHDKEALDWNTRMKIATGAAKGINYLHNEAKPSVIYRDLKSSNILLDKGFVPKLSDFGLAKFGPTGDQSYVDTRVMGTHGYCAPEYATSGKLTRRSDIYSFGVLLLELITGRRAYDENRGHDKHLVDWRRATSTAGRGGHSDRSRFLVFQAIRSESTYRF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02981 331 FunFam Protein kinase superfamily protein 159 233 - -
Arst6g02981 331 CDD STKc_IRAK 88 299 - -
Arst6g02981 331 FunFam probable serine/threonine-protein kinase RLCKVII 54 158 - -
Arst6g02981 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Arst6g02981 331 ProSitePatterns Protein kinases ATP-binding region signature. 88 111 IPR017441 GO:0005524
Arst6g02981 331 Gene3D Transferase(Phosphotransferase) domain 1 159 325 - -
Arst6g02981 331 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Arst6g02981 331 Pfam Protein kinase domain 83 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g02981 331 PANTHER OS07G0668900 PROTEIN 33 303 - -
Arst6g02981 331 ProSiteProfiles Protein kinase domain profile. 82 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g02981 331 SMART serkin_6 82 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g02981 331 SUPERFAMILY Protein kinase-like (PK-like) 64 293 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02981 Arst-Chr6 94607874 94618827 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02981 63 299 Glycoside Hydrolase AT3G07070 66.387 2.49e-110 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Arst6g02981 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02981 K13430 - gmx:100809298 432.18