Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02972 ATGTCTTGTATCTATAAATTAACCCACACCCACTTTTCTCTGTCCTCACACATAAAACAACACTGCTCTTTGTCTCATCCTTCAAATCCCTCTATCTTCTTCTTCCAAAGGGGAGTTCCACTCAAACCCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTTGAGATGGATAACAGGTTGGCCACAAACTCCTCTTATGCTTCTCTTAGATTGCCCGTTGGCTACAGATTCTGCCCCTCTGACGAGGTTTTTGTCTCTTGCTACCTCAAAAACAAGGCCCTTTCAAAAACATTGGATTTTGATGTTGTTCCTGTCTTCGATGTCTTCAACACTGAGCCCAAGAATCTCCCTTCAGGAGGAAAGGTGTTTCTGGAGACAAAGTACTTTTACTTTGATCTGAAAGAGCGTGTGTTTGAAGACAATAACAAGATTGAAGCAGGGAAAGGGCACTGGAAAAGGGTGGGGAAAGGGAATCAGGAGCTTCTAAATAACAACAACAAACTCATTGGGTTCAAGACCAAGTTTGTTTTTTGGAGGAAGAAGAACCGCACTCAATTTCTTAAAACTAAGTGGGTTATGTTTGAGTTCCGTGTTTTTCTCAACCCCTCTCAGATAATGTCATCATGGGCTGGCTACAAAATATATCTGAAGAAGGATAAGAGGAGGAACAAGAAGGCAAAGTTTTCTTGCGAGGAAAGCAGTGACGATGATGAAGAAGAAGCAGAAAGAGCAAGTGAAGTAAATTTTGCAGATGAGATAAGTGGAATTAACACAGGACCTCCTTCACCAACTTCATCTAATGAATCCTCTGTTACAAATTAA 819 0.4103 MSCIYKLTHTHFSLSSHIKQHCSLSHPSNPSIFFFQRGVPLKPPFFFFFFFFFEMDNRLATNSSYASLRLPVGYRFCPSDEVFVSCYLKNKALSKTLDFDVVPVFDVFNTEPKNLPSGGKVFLETKYFYFDLKERVFEDNNKIEAGKGHWKRVGKGNQELLNNNNKLIGFKTKFVFWRKKNRTQFLKTKWVMFEFRVFLNPSQIMSSWAGYKIYLKKDKRRNKKAKFSCEESSDDDEEEAERASEVNFADEISGINTGPPSPTSSNESSVTN 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02972 272 PANTHER NAC TRANSCRIPTION FACTOR 56 70 235 - -
Arst6g02972 272 MobiDBLite consensus disorder prediction 222 272 - -
Arst6g02972 272 Pfam No apical meristem (NAM) protein 71 197 IPR003441 GO:0003677|GO:0006355
Arst6g02972 272 ProSiteProfiles NAC domain profile. 70 216 IPR003441 GO:0003677|GO:0006355
Arst6g02972 272 MobiDBLite consensus disorder prediction 250 272 - -
Arst6g02972 272 Gene3D NAC domain 79 222 IPR036093 GO:0003677|GO:0006355
Arst6g02972 272 SUPERFAMILY NAC domain 61 216 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02972 Arst-Chr6 94256753 94258265 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02972 55 217 NAC Transcription Factor Family AT5G13180 33.728 1.04e-21 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst6g02972 NAM 1.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02972 - - adu:107494709 502.286