Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02961 ATGGGAGACCCAACAGCCGTATACGAGTTCTTGAACCCAACTTGTGATTCTTCTTCAAAAGAATCATCTCCTCCTTCTTCAAAGAGACCACAACAACAGCAACTAACTCAACCGTTTCACCAACAACCACCTTCTAGAACATTCCAATGCCATTTCTGTAACCGCAAGTTCTACACATCCCAAGCCCTCGGCGGCCACCAGAACGCTCACAAGCTCGAACGAGCTGCCGCTAGAAGAACCGCCGTAACGGTCACTCTCCAACCACCACCACCACCGCCGCCGCCGCCACAACACTCGCTCTTTCCGTCCATGGAGTCTTCTCCTCCGTTCTTTCTCAGAAACAGCAACGATCTCAACAACAACAAGGCGGCTATGGTTGCTGCTGCCATGGCTATGCCTCAACATGAAATGGAAGTCGCTGATCATCACGGCGGCGCTGGCGGTGGCCGTTTCTTTGGAAACCCTTACTGGCTTGAAATGGATCCTCCGCCACCATTGCAGCAGTTTCAGCAGCAGCATCAGCAAATGAATCATCATCATCATCATCATCATCATCATGCTCCTTCTTCACTGGGATTCTTCCATGGCGGTGGTGAAGGTGGTTCTTCCGGATCTTCATCTTCCACTTCTACTACTACCAATCCCCCTCAGTATCAGTATCATGTTGTTTCACATAACAATAACGCTTCTGGTTCTGCTGCTCCAGCTTCTTCTTCTGATGCTTCCGATAACGTTAACCTCGATCTCACACTTCGCTTATGA 762 0.4974 MGDPTAVYEFLNPTCDSSSKESSPPSSKRPQQQQLTQPFHQQPPSRTFQCHFCNRKFYTSQALGGHQNAHKLERAAARRTAVTVTLQPPPPPPPPPQHSLFPSMESSPPFFLRNSNDLNNNKAAMVAAAMAMPQHEMEVADHHGGAGGGRFFGNPYWLEMDPPPPLQQFQQQHQQMNHHHHHHHHHAPSSLGFFHGGGEGGSSGSSSSTSTTTNPPQYQYHVVSHNNNASGSAAPASSSDASDNVNLDLTLRL 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02961 253 ProSiteProfiles Zinc finger C2H2 type domain profile. 48 75 IPR013087 -
Arst6g02961 253 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 14 253 IPR044246 GO:0009788
Arst6g02961 253 Gene3D Classic Zinc Finger 25 87 - -
Arst6g02961 253 MobiDBLite consensus disorder prediction 161 253 - -
Arst6g02961 253 MobiDBLite consensus disorder prediction 200 246 - -
Arst6g02961 253 MobiDBLite consensus disorder prediction 11 46 - -
Arst6g02961 253 ProSitePatterns Zinc finger C2H2 type domain signature. 50 70 IPR013087 -
Arst6g02961 253 MobiDBLite consensus disorder prediction 175 189 - -
Arst6g02961 253 SUPERFAMILY beta-beta-alpha zinc fingers 45 75 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02961 Arst-Chr6 94017379 94018140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02961 46 89 C2H2 Transcription Factor Family AT5G14010 68.182 1.36e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02961 - - ahf:112759108 355.91