Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02960 ATGGGGAAGCCGAAGCATGTCGCTCCTCCCGAAGACTCTGACGACGAACTGCAGGTTCCAAAGCCTCAACCCGGACAAGAAGATAGCAGCGAGGAAGAGGATGAAGCAACTTCATCTGAGGAAGACGAAGACACCGATGAAGGCGAAGATGAACGTGACAAGCACGTGCTGCTTCCCAGGAAGCCTCAACCGCAAGTGGTTTCCAAACCCTCGTCTTCTTCTGAAGACGATTCGGAGTCGGAGCCGGAGCCGGAACCGGAACCCGAGTCCGAGCCCGAGCCCGAGCCCGAGCCCGAGCCCGAGCCCGAGCCTGAGCCTGAGCCAGAGGCTCTATCGAAAAACGCTAAATCCTCTTCAAAGTTGAAGTCTCCACCTTCGTCTGCTGTGAGTCAAGCCAAATCCGGGTCAAAGCGAGCAGCCAAGAACAGTATCGATCACTCGAAGCAAGCTAAACGTGGGAAGAAGGCACAGGAGGATCACGCGGCCTCTGACGAAGAGGATTCGAAGAAATCACGTGACGTTTCGAAATCCCTCTTTCAGAGGGTTTTCAGCGAGAAAGATGAGATAGGTATCTTGAAAGGCCTGGCTGAGTTCATCGCAAAAACAGGGAAGGAACCCTATAAATGCGCTGAAGAATTTTACGATTTCTTGAAGGGATCGAATTTGATTGGGTCAAATGCATCATGCAACCAATTGAAGGATAAGATCCACCGGCTGAAGAAGAAGTTTGAGAACAATCTAGCCAAAGAGAAGAGCGGCAAGGGGACAACTTTAAAGCCGCACGAGTTGGAAGCATTTCAGTTGGGAAAGAATGTTTGGGGCCACGATGGCCGGGGCGGTAAAACAGTGCGCAACGAAGCTTCGAAAAAGGATAAGGTTAATAATGAGAAGGCTGGGGAGAGTACCCCCAAGAAGGCGCTGAATTCTGAACCCTTGGATTCAAGGATTAAGGAATTGTCTGGGACTAGTTTAGCTTTGACTTCAATGTTGAAATATGATGGGACTTTTGGTAAGCCTTTCGGTGAAGACTATATTAGAAAGGGAATAGAGTTGCTTGGAGTCTCAAAGAGGGAAGAGATCGAGGCTAAGTGGAGAAAGTTCGAAGATGCTGAAAATAAATTGTATGCGGAGATAGCTGAATTCTATGCTGAACAGGCTAAGTTATTATGTCAAGCAAATAGCTCGTCGTCCTCCTAG 1197 0.4904 MGKPKHVAPPEDSDDELQVPKPQPGQEDSSEEEDEATSSEEDEDTDEGEDERDKHVLLPRKPQPQVVSKPSSSSEDDSESEPEPEPEPESEPEPEPEPEPEPEPEPEPEALSKNAKSSSKLKSPPSSAVSQAKSGSKRAAKNSIDHSKQAKRGKKAQEDHAASDEEDSKKSRDVSKSLFQRVFSEKDEIGILKGLAEFIAKTGKEPYKCAEEFYDFLKGSNLIGSNASCNQLKDKIHRLKKKFENNLAKEKSGKGTTLKPHELEAFQLGKNVWGHDGRGGKTVRNEASKKDKVNNEKAGESTPKKALNSEPLDSRIKELSGTSLALTSMLKYDGTFGKPFGEDYIRKGIELLGVSKREEIEAKWRKFEDAENKLYAEIAEFYAEQAKLLCQANSSSSS 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02960 398 MobiDBLite consensus disorder prediction 1 175 - -
Arst6g02960 398 MobiDBLite consensus disorder prediction 272 313 - -
Arst6g02960 398 MobiDBLite consensus disorder prediction 277 299 - -
Arst6g02960 398 Pfam Protein of unknown function, DUF573 179 274 IPR007592 GO:0006355
Arst6g02960 398 PANTHER BNAANNG10740D PROTEIN-RELATED 68 389 IPR007592 GO:0006355
Arst6g02960 398 MobiDBLite consensus disorder prediction 1 18 - -
Arst6g02960 398 MobiDBLite consensus disorder prediction 139 175 - -
Arst6g02960 398 MobiDBLite consensus disorder prediction 28 49 - -
Arst6g02960 398 MobiDBLite consensus disorder prediction 112 138 - -
Arst6g02960 398 MobiDBLite consensus disorder prediction 77 105 - -
Arst6g02960 398 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02960 Arst-Chr6 93991438 93992968 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02960 71 393 GeBP Transcription Factor Family AT1G61730 29.706 9.37e-23 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Arst6g02960 DUF573 2.5e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02960 - - adu:107494693 657.136