Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02924 TTGGAGAGGAAATGGGGAGAGGGGGAAGTTGAAGAAGGTAGCATTGAGGCTTCAGTGTGGAATTACGATTCTGATGAGAATGTTGAGAGTGGTAGTAAGGCTGTGGTGGTGGAGGAGAGTGGGAATCATAGCGGCGGAGGGAATGGGAATTTGAGCTTGAGTGGCGGTGTCAATGGTGGAGATCAGAAAGGGAAGAAGAAAGGGATGCCGGCGAAGAATCTCATGGCGGAGAGGCGGCGCAGGAAGAAGCTTAATGATAGGTTGTACATGCTTAGGTCTGTTGTGCCAAAGATTAGCAAGATGGATAGGGCTTCGATACTTGGGGATGCAATCGACTACTTGAGGGAGTTACTGCAGCGGATTAATGATCTTCACAATGAACTGGAGTCAACTCCTCCTGGCTCTTCGCTGCAATCTTCCACCACCAGCCTTCAACCTTTGACACCCACGCCGCAAACCCTTCCGTGCCGGGTGAAGGAGGAACTGTATCCTGGTGTCTTGCCAAGCCCCAAAAACCAACCTGCAAAGGTGGAAGTTAGGGTGAGGGAGGGGAGAGCTGTCAACATTCATATGTTTTGTACTCGCCGACCAGGTCTTCTGCTTTCAACCATGCGGGCTCTGGATAACCTCGGCTTCAATGGCTTTGCTTTAGACGTCTTCAGAGCCGAGCAATGCAGAGAAGGGCAGGATGTTCTTCCTGAGGAAATCAAAGCAGTGCTGCTGGATTCAGCAGGGATCCATGACATGATGTGA 753 0.5086 MGNLERKWGEGEVEEGSIEASVWNYDSDENVESGSKAVVVEESGNHSGGGNGNLSLSGGVNGGDQKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLRELLQRINDLHNELESTPPGSSLQSSTTSLQPLTPTPQTLPCRVKEELYPGVLPSPKNQPAKVEVRVREGRAVNIHMFCTRRPGLLLSTMRALDNLGFNGFALDVFRAEQCREGQDVLPEEIKAVLLDSAGIHDMM 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02924 253 Gene3D - 64 135 IPR036638 GO:0046983
Arst6g02924 253 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 120 IPR011598 GO:0046983
Arst6g02924 253 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 140 IPR036638 GO:0046983
Arst6g02924 253 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 38 249 - -
Arst6g02924 253 FunFam BHLH transcription factor 67 135 - -
Arst6g02924 253 Pfam Helix-loop-helix DNA-binding domain 78 120 IPR011598 GO:0046983
Arst6g02924 253 SMART finulus 77 126 IPR011598 GO:0046983
Arst6g02924 253 MobiDBLite consensus disorder prediction 46 60 - -
Arst6g02924 253 CDD bHLH_AtAMS_like 74 137 - -
Arst6g02924 253 MobiDBLite consensus disorder prediction 42 72 - -
Arst6g02924 253 MobiDBLite consensus disorder prediction 129 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02924 Arst-Chr6 92980281 92983410 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02924 1 226 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 67.220 8.62e-93 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst6g02924 HLH 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02924 - - adu:107494642 432.565