LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst6g02914	ATGCGGCACCCAGCCCCACCCAGGGAAGCGAGAAAGCGCCAACAAATAATAACAAAAAATGCTTTGTTCATTCTGAGCGTTGGTAAAATTAGAATAGAAGCCTTTCCCAACGACGAAAATCACGACCCTTCTCCAAAACAAACCGCCCCTCCCCCTCTCTCCCTTTTTTTCATGTCCATCTTGCCCTCACAAGCCCAGCCAGCACCATCGTCTTCTTCATCTCCTTCAACTTCAAACCCTAATTCCCAATATGGATTCCCGAATTCTCTTCCCTCTTCCTCAATTTCCTCTCTCTCTTCGCAATTCAACAACTTCGACAGCAACATCGATGCTTCTTTCGGATCCCTTCGAATCTCTGATCCCCAATCTCCCTGCCACCATCCAGGTTCATCAACTCAAGCTACAGAAGATTCTCGTGGACCTTCCGAAAAGGTGATGGAGTCGGTGTCTGCAAGTGGTATAAGTTCTTCTTCACCTTCACAAAACTCTGGAATACATTCTAGGAGTCACGCTGGAAAACGAGCAGGTGGNNATAGACATCAACAGAATCCTGTGTCTGCAAATTATCCTGGAAGTTCCCCTCCACTGGGAAGGAGATCTCAGATGGTGAATGGCAATTACTTGCTGAATTTTCAGTATGATCCAATATCCCGTTCTCAACCAAGAGGGCCTCCACCTCCTCTTCCAAGAAGGCAACGGAAGAGAAGGCCATACAACAAGGATTTGTTTCTGCAGGCAAATTACAGATTCATGGTCCTAGATACAGGAAATTATTCTCCCCAGTCGATGGATCCAGATAAAATGTTGCAGTGGGAGGATATTATATGTGTGACATATTCAACCCCCTTCCCAGTTCAGTGCCCAATTTGTTTGGAGTATCCTCTGTGTCCCCAGATAACCTCATGCGGGCATATTTTTTGTTTCCCATGTATACTACAGTACTTGATGCTGGGTGAAGAGGATCACAAAGGTGATTGCTGGAAAAGGTGTCCTTTATGCTTTGTGATGATATCTGTCAAGGATTTGTATACTGTCCACATAACAAATGTCAAACAATATCAAGTAGGGGATAATATTGAGTTCACATTTTTAACACGAAAAAAGGATTCATTTACTTTATCTCATAAAAATAAACAAGAGACAGATATTGCATCAAGTAGCAATGGAGATTTATGTGATCCGTTTTCCAAGTTCACACTCACATCAGATGTAGATCTCTCTGTTAGACACGCAATATCAGATCTAGATGGCTGGCTGGCCAGAGCTGATTCAGGGCTTGTCGATGACCTGGAGAAGCTTCCATATGTTTGTGCTGCAATGCAACAACTAAAACAAAGGAAGAAATATTGGAATGAACATAGGGCTTCTGACATTTCTTCAAGGCTTATTGATTCTGAACATCAGATACAATTGACAGCTGCAAATGCTGTGGATGCTGATGGTGAAACCCATTCTAATGGATCAAGGATTTCCACTGTAGATTTCCAGGACCAAAGTAAGGGAATAATATTGGATAAGTCAACTGCTGAAGCCTGTCCACATCAAACTTTGGATGGAGAGAAATTGATAGAACAAGAAATCAATCCATCCTCATCATATGAGGAGAAGAATGGTGTTCAAAGGCATTCAAATGGAATTGGAGAGACGAAGGAAAGTGATTCTTACAATTTCTTTCAGGCTGTGGATGGCCAGCATATAATTCTCCATCCACTGAACACGAAATGTTTACTTCATCATTATGGGAGTTATGACATGCTTCCACACAGAATAACGGGAAAGATTCTGCAAATGGAAACGGTTACCCAGTCCGAGGCCATGAGGAGGCGATATAAATTCTTAAGTCATTTTCCGTTGACAACAACTTTTCAGCTGTGTGAAATTGATTTGAGTGAGATGTTGCCTCCTGAAGCACTGGCCCCATTTATGGATGAAATAAAGAAGCGTGCACACCAGAGGAAACAACTCGCAAAGAAGGAGCAAAAGGAAAAATTCAAGGCGGAAGCTGCTGCCGCTTATTCTTTTCCCATTCCAAGTTATAAACTTGCTTCGTATGATGACACTCCAACATTTTCTATGGATGACTTTGAAGCCTTGGGAAATTCAGCTATGTCATCAAGTCCTCCAGTTGTTGGGGAAAGAAAAACATTCTCAAATGTTACCCGGCTTGGATTCGCCGCTGCTCATGATTCTCCATCCTTACAAATCCAAGAAACCAGCAGTACCCATAATAACAATACGGTCACTAGTCCTACTGGCACAACAGGTCCAAGAAATGTGGAGACACCATCATATTCCAATGTTACATCCAGAGCCGAATCAAATGTAAACATGAATGCATCAAACACAAATGACTTTGGGAAGAAGCGGAAAAAGCAAAATCGAGTTCTCCTATCGACATCTGGTGGCAGGCGTTACTGA	2418	0.4256	MRHPAPPREARKRQQIITKNALFILSVGKIRIEAFPNDENHDPSPKQTAPPPLSLFFMSILPSQAQPAPSSSSSPSTSNPNSQYGFPNSLPSSSISSLSSQFNNFDSNIDASFGSLRISDPQSPCHHPGSSTQATEDSRGPSEKVMESVSASGISSSSPSQNSGIHSRSHAGKRAGGXRHQQNPVSANYPGSSPPLGRRSQMVNGNYLLNFQYDPISRSQPRGPPPPLPRRQRKRRPYNKDLFLQANYRFMVLDTGNYSPQSMDPDKMLQWEDIICVTYSTPFPVQCPICLEYPLCPQITSCGHIFCFPCILQYLMLGEEDHKGDCWKRCPLCFVMISVKDLYTVHITNVKQYQVGDNIEFTFLTRKKDSFTLSHKNKQETDIASSSNGDLCDPFSKFTLTSDVDLSVRHAISDLDGWLARADSGLVDDLEKLPYVCAAMQQLKQRKKYWNEHRASDISSRLIDSEHQIQLTAANAVDADGETHSNGSRISTVDFQDQSKGIILDKSTAEACPHQTLDGEKLIEQEINPSSSYEEKNGVQRHSNGIGETKESDSYNFFQAVDGQHIILHPLNTKCLLHHYGSYDMLPHRITGKILQMETVTQSEAMRRRYKFLSHFPLTTTFQLCEIDLSEMLPPEALAPFMDEIKKRAHQRKQLAKKEQKEKFKAEAAAAYSFPIPSYKLASYDDTPTFSMDDFEALGNSAMSSSPPVVGERKTFSNVTRLGFAAAHDSPSLQIQETSSTHNNNTVTSPTGTTGPRNVETPSYSNVTSRAESNVNMNASNTNDFGKKRKKQNRVLLSTSGGRRY	805

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst6g02914	805	PANTHER	RING FINGER 10 FAMILY MEMBER	133	805	IPR039739	-
	Arst6g02914	805	MobiDBLite	consensus disorder prediction	731	783	-	-
	Arst6g02914	805	MobiDBLite	consensus disorder prediction	148	168	-	-
	Arst6g02914	805	Pfam	Zinc finger, C3HC4 type (RING finger)	287	333	IPR018957	GO:0046872
	Arst6g02914	805	MobiDBLite	consensus disorder prediction	728	805	-	-
	Arst6g02914	805	FunFam	RING finger protein 10	280	348	-	-
	Arst6g02914	805	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	280	384	IPR013083	-
	Arst6g02914	805	ProSiteProfiles	Zinc finger RING-type profile.	287	333	IPR001841	-
	Arst6g02914	805	MobiDBLite	consensus disorder prediction	214	236	-	-
	Arst6g02914	805	ProSitePatterns	Zinc finger RING-type signature.	302	311	IPR017907	-
	Arst6g02914	805	Coils	Coil	642	662	-	-
	Arst6g02914	805	MobiDBLite	consensus disorder prediction	59	139	-	-
	Arst6g02914	805	MobiDBLite	consensus disorder prediction	59	201	-	-
	Arst6g02914	805	MobiDBLite	consensus disorder prediction	35	54	-	-
	Arst6g02914	805	CDD	RING-HC_RNF10	285	342	-	-
	Arst6g02914	805	MobiDBLite	consensus disorder prediction	181	201	-	-
	Arst6g02914	805	MobiDBLite	consensus disorder prediction	529	548	-	-
	Arst6g02914	805	SUPERFAMILY	RING/U-box	286	340	-	-
	Arst6g02914	805	SMART	ring_2	287	333	IPR001841	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst6g02914	171	755	C3H Transcription Factor Family	AT3G26730	56.811	0.0	652

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst6g02914	K26979		-	gmx:100798764	980.704

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Arst6g02914	6	92846694	92854330	Arst6g02914	6	92846694	92854330	ECH