Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02900 ATGAGTCCATCTTTTGATGCTATTAGCAAGATAGTTCCTCCAAGAGAGGCTTGGAGGCTTAAAGTGAGGGTAATTAGGGCTTGGATTGTTCCAAGCTTTGGAAATCCAGATTCTCCAAATTCAATGGAGCTCATTTTGGTGGATGAAAATTCAAACAAAATCCAGGCCACTATAAGGAAGCAACTTATCAACAGGTTTAAAGATAATATTATTGAAGGGAATTGCTACAAGATGTGTTATTTCTCTGTTGTTCCAAATCATGGCTCTTATAGAGCTACAAAACATGAGTTTAAGCTTACATTCCTCTTCCAAACAATAGTAACAACTTTACCAGATGATATCATACCAAGAGTCTGTTTTACTCTATATCCTTTTGAGGAGATATTGCAAATGAGTCAAGATCATGATTATTTAGTTGATGTTATTGGGTTGCTGACTTTAGTTGGAGAGGAAAAAAGTTATGATAAAGATGGAAAAACAATCAAGATGGTTGTTGCGGAGCTTTCTTCTCAAAAGATGGTGCTTAGGTGCGCCCTGTTTGGAGAATATGTGGATCAACTAAATCATTTTCTTTCTTCTGGTTATGTTGAACAACCAGTAGTGATTCTTCAACTTGCCAAAGTTAAGCTTTTTCGAGGGCAACCTGGGTTACAAAATGTCATGAAAGCAACAAAAATATATCTTAATCCTGACTTGGCAGCTGTTGTTGATTTCAGGAAGAGCGTGGTAGAGCAAGGGATAAATGGGACCCAGCCACTGTTTATTGCTAATGAAGGAAAAACTATCTCATTGGAGGATGACTTCATGAGGTTGACTAAGAAATCTACAATAGATGAGTTGCAAGAAAACAAGGAGGATGGAACCTTTGTCATTTTAGGTACTATCACTGATGTTGTAGAAGAGGGGTGCTGGTGGTATTCTACCTGTGTTTGTGGGAAGACAGTACATCCTGAATCTGGTGTTTACTTTTGTGATATGTGCATGCATCATGTGACAAATGTGATCCCAAGGTATAGGCTCAAGGTAGTTGTATCAGATGAAACTGGACAGGGTATATTTGTCCTCTTTGATCGTGAAACAACCTACTTGGTTAAAAAAACATGTGCTGACCTATTTAATGAGGTACATAAAGATTCAAAGGATGCACCTGTTCCTGTGTTTGGCCCTGAGTTGGGTGAAACTTCTAATACAAAATGTGTAGAGAATACTGTCATGTCATCTTTTCTTCAAAAAGAAGCAAATGTTGCTGGACTTGATGATATACACTTAGATATGGAAGGTGTTAAGGAGGTTGATATTCAAGATCATTCTGTTGATAGTGATGAAAATGTAGTGCTGTCGGATGATATTGGCTCACTTATTCGGTCTGATGTTGATGAAACTCAGGATTTGCTCTCGCACCTTTTAGATGACTCAAGGAAAGTTAATGTGCCTAATGTTGTTCCCAAAGATGCAGTATTTTTAAAGGTGAAGAGGAATCTTGAGGCTGATTTTGATAAGGAACTTGAGGATACTGTTGCTCATTGCTCTAAAATAATCAAGATTGAAGATAATAGCATATGTGGCAGTGATGCAAATGTTGACATTGACATTGATTGGATCAATGTTGAATTTTTAAATCAGATCAAATGCTCTGGATTACCAAATCATTCTTTGAAGTTGAAAAAAGGTGTTCCTGTTATTTTATTGAGAAATATTGACGCTGCTGGTGGATTATGCAATGGTACTAGACTTATTGTTCACAGTCTTGGAAGAAATGTGATTACTGCAGATATTGTTTCTGGTAGTAATGTTGGGGATAGAGTGTAG 1809 0.372 MSPSFDAISKIVPPREAWRLKVRVIRAWIVPSFGNPDSPNSMELILVDENSNKIQATIRKQLINRFKDNIIEGNCYKMCYFSVVPNHGSYRATKHEFKLTFLFQTIVTTLPDDIIPRVCFTLYPFEEILQMSQDHDYLVDVIGLLTLVGEEKSYDKDGKTIKMVVAELSSQKMVLRCALFGEYVDQLNHFLSSGYVEQPVVILQLAKVKLFRGQPGLQNVMKATKIYLNPDLAAVVDFRKSVVEQGINGTQPLFIANEGKTISLEDDFMRLTKKSTIDELQENKEDGTFVILGTITDVVEEGCWWYSTCVCGKTVHPESGVYFCDMCMHHVTNVIPRYRLKVVVSDETGQGIFVLFDRETTYLVKKTCADLFNEVHKDSKDAPVPVFGPELGETSNTKCVENTVMSSFLQKEANVAGLDDIHLDMEGVKEVDIQDHSVDSDENVVLSDDIGSLIRSDVDETQDLLSHLLDDSRKVNVPNVVPKDAVFLKVKRNLEADFDKELEDTVAHCSKIIKIEDNSICGSDANVDIDIDWINVEFLNQIKCSGLPNHSLKLKKGVPVILLRNIDAAGGLCNGTRLIVHSLGRNVITADIVSGSNVGDRV 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02900 602 PANTHER UNCHARACTERIZED 508 601 - -
Arst6g02900 602 CDD RPA1_DBD_A_like 19 107 - -
Arst6g02900 602 Pfam PIF1-like helicase 453 583 IPR010285 GO:0000723|GO:0003678|GO:0006281
Arst6g02900 602 SUPERFAMILY Nucleic acid-binding proteins 120 242 IPR012340 -
Arst6g02900 602 Pfam Replication factor-A C terminal domain 291 380 IPR013955 -
Arst6g02900 602 Pfam Domain of unknown function DUF223 43 138 IPR003871 -
Arst6g02900 602 Gene3D - 264 416 IPR012340 -
Arst6g02900 602 Gene3D - 114 250 IPR012340 -
Arst6g02900 602 CDD RPA1_DBD_C 274 383 IPR047192 -
Arst6g02900 602 SUPERFAMILY Nucleic acid-binding proteins 4 113 IPR012340 -
Arst6g02900 602 SUPERFAMILY Nucleic acid-binding proteins 275 383 IPR012340 -
Arst6g02900 602 CDD RPA1_DBD_B_like 140 242 - -
Arst6g02900 602 Gene3D - 6 112 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02900 Arst-Chr6 92630740 92635068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02900 8 349 Core DNA Replication Machinery Family AT2G06510 21.389 5.28e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02900 - - ahf:112711209 729.939