Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02891 TATAGGTATCATCAAATCAAAGAGAAGAAGGTAAGTAAGGAAGCTAAGGTGGATCGAAGGCATGGGAAGAGGCCTCTTCTTCCTTCTGATTCTAGATCAGAAGAGAAAAGAAGAGAAGAAGATGATTGTTTTCTCCACAACGTTCCTCTTCAGCCACCTTCACAATCTGAAATCCAACAACAAGAAGAGGAAGAACCTTCACCAAATCTTCAAATAGTTCAGCTCCAAGACCAAGGCAAGAAGGATGTGAGAAAACGACATTATAGAGGAGTAAGGCAGAGACCATGGGGAAAATGGGCAGCCGAAATCAGAGACCCTAAAAAGGCGGCGAGAGTTTGGTTAGGAACCTTTGACACTGCAGAAGCCGCAGCAGCAGCTTACGATTCTGCGGCCTTAAAATTTAAAGGTAACAAAGCCAAACTCAATTTTCCTGAGCGCGTTGCCGCTTCCAATTCCGCTTCAACAACTTATCATCACTCTTCACAACCACCACCTACTATGGTGTATCGACCTTCTTCACAACCTTATACTCCATTAATGCCGCCGCCGACGTCCTCCTCCACATCGGAGGAAGGAGGATTTCCAAACCTAATGCAATATGCGCAGTTGCTTTGGAGTAGAGACGATGATGATCTACAACGTGCAGCTTCAGGGCTTTATCATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAACAATTTTTCTTCATATGGTTCTGTAATGAATTCATCATCAGGGTTGTCTTCTTCTTCTACTACTTCAGATTCTGCGGTTGTGATGACTGGTCAACTCCATAGCATGATGGGTGCACCACCACGACCACCCAAGGGAGATTATGATTATTATTTTGGTCAAGGGACTGATTTTGATGGCAGGAATTGA 918 0.4096 YRYHQIKEKKVSKEAKVDRRHGKRPLLPSDSRSEEKRREEDDCFLHNVPLQPPSQSEIQQQEEEEPSPNLQIVQLQDQGKKDVRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAAAAYDSAALKFKGNKAKLNFPERVAASNSASTTYHHSSQPPPTMVYRPSSQPYTPLMPPPTSSSTSEEGGFPNLMQYAQLLWSRDDDDLQRAASGLYHNNNNNNNNNNNNNNNNNNNNNNNNFSSYGSVMNSSSGLSSSSTTSDSAVVMTGQLHSMMGAPPRPPKGDYDYYFGQGTDFDGRN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02891 305 MobiDBLite consensus disorder prediction 49 70 - -
Arst6g02891 305 MobiDBLite consensus disorder prediction 152 167 - -
Arst6g02891 305 Pfam AP2 domain 87 136 IPR001471 GO:0003700|GO:0006355
Arst6g02891 305 SUPERFAMILY DNA-binding domain 87 145 IPR016177 GO:0003677
Arst6g02891 305 Gene3D AP2/ERF domain 86 146 IPR036955 GO:0003700|GO:0006355
Arst6g02891 305 SMART rav1_2 87 150 IPR001471 GO:0003700|GO:0006355
Arst6g02891 305 MobiDBLite consensus disorder prediction 152 193 - -
Arst6g02891 305 MobiDBLite consensus disorder prediction 217 305 - -
Arst6g02891 305 MobiDBLite consensus disorder prediction 217 273 - -
Arst6g02891 305 MobiDBLite consensus disorder prediction 168 182 - -
Arst6g02891 305 PANTHER DNA-BINDING DOMAIN 40 244 IPR044808 GO:0003700|GO:0009873
Arst6g02891 305 MobiDBLite consensus disorder prediction 1 70 - -
Arst6g02891 305 MobiDBLite consensus disorder prediction 1 45 - -
Arst6g02891 305 FunFam Ethylene-responsive transcription factor 2 86 145 - -
Arst6g02891 305 PRINTS Ethylene responsive element binding protein signature 110 126 IPR001471 GO:0003700|GO:0006355
Arst6g02891 305 PRINTS Ethylene responsive element binding protein signature 88 99 IPR001471 GO:0003700|GO:0006355
Arst6g02891 305 CDD AP2 87 145 IPR001471 GO:0003700|GO:0006355
Arst6g02891 305 ProSiteProfiles AP2/ERF domain profile. 87 144 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02891 Arst-Chr6 92419316 92421483 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02891 68 164 AP2-EREBP Transcription Factor Family AT5G61890 72.449 3.24e-41 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Arst6g02891 AP2 3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02891 - - adu:107494582 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02891 6 92419316 92421483 Arst3g03863 3 109536695 109538976 ECH
Arst6g02891 6 92419316 92421483 Arst6g02891 6 92419316 92421483 ECH
Arst3g03863 3 109536695 109538976 Arst6g02891 6 92419316 92421483 ECH
Arst6g02891 6 92419316 92421483 Arst5g04511 5 106409944 106412406 PCT