Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02878 ATGTCAAGTTCTCTTGCAGCATTATTAGGAGGAGCTGCAGGAGCCGTGGCATTGGCAGGGATTGTTATAATACTCATATGGTTTTGTATTTTTCGCAAGAGAAGCGTTTCGAGAACTTCAGAGACAGGATCCTCTGATCCTTCCCAAGGACGACATGGCACGATTGAGTTGTCGATACGAGATACTAGGCGTTTTGAGATGGAGGAACTATCTGGGGCTACAAAGAGTTTCAGTGACAAGAATTTGATTGGAGAAGGGAAATTCGGGGAGGTTTATAAGGGTTTGCTTCAAGATGGTATGATTGTAGCAATCAAGAAGAGGCGTGGACTCGCGAGTCAGGAGTTTGTTGATGAGGTACGCTATCTCTCATCGATTCACCATCGGAATCTCGTAACTCTTTTAGGCTACTGCCAGGAAAACAACCTGCAGGTTCTTATATACGAATATGTGCCTAATGGAAGCGTCTCCAGTCACTTGTATGGCGCCAATCAACAATCGCGAGAGAAGCTAGAATTCAAGCATAGACTTTCAATAGCTCAAGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCCTTGAGCCCCCGTTTGGTGCACAAGGATTTCAAAACAGCGAATGTACTTGTCGACGAAAACTTCATTGCTAAGGTTGCCGACGCAGGACTTCGTAATTTTTTGGGGAGAGTTGAGATTGCAGGACCATCCTCTCTAGTAGCCGCAGATGAGATATTTCTTGCACCCGAGGTGAGAGAATTCAGACGATTTTCGGAAAAGAGCGATGTATACAGCTTTGGAGTATTTTTGCTGGAATTGTTGAGTGGGAAGGAAGCAACAGAATCAGCATCTCTGGACTCTAGCTACAATCTAGTTGAATGGGTGCAAAATAATGAAGACCATGGCATGATGTCTAACATAATTGATCAAAGATTGGGAAGCACTTTCACTGCTGAAGGAATGGAAGAATTCATAATGCTGATGACAAGGTGTTTAGAATCTTCAAGTGAGAGAAGACCAGGCATGAGTTATGTGGTGATGGAACTTGACAGAATACTTGAGAAAGAAGTGAACTTGACAACAATCATGGGTGAAGCCACCCCAACAGTTACCCTTGGAAGCCAATTATTCAGACCAACAACAACATAA 1140 0.4368 MSSSLAALLGGAAGAVALAGIVIILIWFCIFRKRSVSRTSETGSSDPSQGRHGTIELSIRDTRRFEMEELSGATKSFSDKNLIGEGKFGEVYKGLLQDGMIVAIKKRRGLASQEFVDEVRYLSSIHHRNLVTLLGYCQENNLQVLIYEYVPNGSVSSHLYGANQQSREKLEFKHRLSIAQGAAKGLAHLHSLSPRLVHKDFKTANVLVDENFIAKVADAGLRNFLGRVEIAGPSSLVAADEIFLAPEVREFRRFSEKSDVYSFGVFLLELLSGKEATESASLDSSYNLVEWVQNNEDHGMMSNIIDQRLGSTFTAEGMEEFIMLMTRCLESSSERRPGMSYVVMELDRILEKEVNLTTIMGEATPTVTLGSQLFRPTTT 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02878 379 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Arst6g02878 379 FunFam Protein kinase superfamily protein 43 149 - -
Arst6g02878 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Arst6g02878 379 Gene3D Transferase(Phosphotransferase) domain 1 150 364 - -
Arst6g02878 379 SUPERFAMILY Protein kinase-like (PK-like) 62 348 IPR011009 -
Arst6g02878 379 FunFam Protein kinase superfamily protein 150 363 - -
Arst6g02878 379 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 14 355 IPR047117 -
Arst6g02878 379 Gene3D Phosphorylase Kinase; domain 1 39 149 - -
Arst6g02878 379 ProSiteProfiles Protein kinase domain profile. 77 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g02878 379 Pfam Protein tyrosine and serine/threonine kinase 81 346 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02878 Arst-Chr6 92180064 92185047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02878 4 372 Receptor kinase-like Gene Family AT3G46290 36.962 1.26e-64 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Arst6g02878 PK_Tyr_Ser-Thr 3.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02878 - - gmx:100305436 603.979