Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02857 ATGAGTTTCCAAGATATCCAAGGCGGCCCTAACGCAGCCGTGCGAAGAAGCCAGTCTCCGTCGCAGGCCATCGCCGCCGGAATCTTCCAGATCAACACTTCCGTCGCCACTTTCCGCCGCCTCGTTGATTCTCTTGGAACCGTTAAAGACACTCCCGACCACCGCCAGAAGCTGCACAACACGAGACAGAGGATATTGAAGCTGGTGAAGGATATTTCTGCTAAGCTCAAGTCGTTGAGTGAATCTGATCGCCATGCTTCTGGTGCTAATGCTAACAAGAAAATTGAAGATGCTAAGCTAGCAAGAGATTTCCAAACCACATTGCAGGAATTCCAGAAGGTGCAGCAGCTTGCATCCGAGCGCGAATCGACTTACACCCCTACTACTGCCCCTCCGCCCTCTTTTCCAACAAGCTCTGGCTCTGGTGAAGAATCCGGTGAGAGAGACCAGGAAAGCCAACCTTTTATGAGGGAGCAAAGAAGGCAAGAGGTACTTCTCTTGGATAATGAAATCTCCTTCAATGAGGCCATGATTGAAGAAAGAGAACAGGGTATTAGAGAGGTAGAAGAACAAATCGGACAAGCAAATGACATATTCAAGGACCTGGCTGTCCTTGTTCATGACCAAGGGGTTGTTATTGATGACATTCAATCGAACATCGATAATTCCGCTGCTGCAACAACCCAAGCGAGAGTTCAGTTAGCAAAAGCTTCCAAAAGTGTGAAATCTAGAACCTCATGGTGTTGGTGGGCGCTTGTAATTTTTGTGGTGATTGTGGTGATCATACTTGTTGTACTGATTATTTAG 807 0.4746 MSFQDIQGGPNAAVRRSQSPSQAIAAGIFQINTSVATFRRLVDSLGTVKDTPDHRQKLHNTRQRILKLVKDISAKLKSLSESDRHASGANANKKIEDAKLARDFQTTLQEFQKVQQLASERESTYTPTTAPPPSFPTSSGSGEESGERDQESQPFMREQRRQEVLLLDNEISFNEAMIEEREQGIREVEEQIGQANDIFKDLAVLVHDQGVVIDDIQSNIDNSAAATTQARVQLAKASKSVKSRTSWCWWALVIFVVIVVIILVVLII 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02857 268 Pfam Syntaxin-like protein 24 125 IPR006011 GO:0016020
Arst6g02857 268 SMART SynN_4 8 123 IPR006011 GO:0016020
Arst6g02857 268 PANTHER SYNTAXIN 19 259 IPR045242 -
Arst6g02857 268 Gene3D - 11 129 - -
Arst6g02857 268 Gene3D - 169 268 - -
Arst6g02857 268 SMART tSNARE_6 170 237 IPR000727 -
Arst6g02857 268 FunFam Syntaxin-22 like 15 129 - -
Arst6g02857 268 SUPERFAMILY t-snare proteins 19 230 IPR010989 GO:0016020|GO:0016192
Arst6g02857 268 MobiDBLite consensus disorder prediction 113 157 - -
Arst6g02857 268 FunFam Syntaxin-22 like 168 268 - -
Arst6g02857 268 Pfam SNARE domain 212 263 IPR000727 -
Arst6g02857 268 CDD SNARE_Qa 178 236 - -
Arst6g02857 268 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 175 237 IPR000727 -
Arst6g02857 268 MobiDBLite consensus disorder prediction 113 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02857 Arst-Chr6 91531483 91534084 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02857 1 255 SNARE and Associated Proteins AT5G46860 58.301 4.43e-99 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02857 - - aip:107604899 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02857 6 91531483 91534084 Arst6g02857 6 91531483 91534084 ECH