Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02804 ATGGGATCACCCGAATCAAATTTGCCACCAGGTTTTAGGTTCCATCCAACGGATGAAGAACTCATTCTTCACTACCTTAGGAAGAAGGTAGCATCCATACCCTTACCTGTTTCCATCATCGCTGAGGTTGATATCTACAAATTGGATCCATGGGAATTACCAGCTAAGGCTGCGTTTGGTGAGAAAGAATGGTACTTCTTCAGTCCAAGAGACCGGAAGTACCCAAACGGTGCGAGGCCAAACAGGGCAGCTGCTTCAGGGTATTGGAAGGCTACGGGTACCGACAAGACCATCGTGGTGTCGCCGGCGGCCACAGTTACACGTAGAGTAGGCCAAGAGAGCAGCGTTGGTGTCAAGAAGGCTCTTGTTTTCTACAAAGGAAGGCCTCCAAAGGGTGTCAAAACCAATTGGATCATGCACGAATATCGTCTTGTAGACAACAACAGACCCATTAAGCTCAAAGATACCTCCATGAGATTGGATGACTGGGTTCTATGCCGGATTTATAAGAAGTCGAAATTCTCAGTATCTTCACCGGAGGAATCACCGTCGAGTGAAGTACAGGCTGCAGAAGAAAATGGTTTATTCAAGAACACCATTTTAAGGAGTCCAATTCCAACACCGTCGCCATCGCCACCGCCGCCGCTGCCGCAGCCACTGCTCTCTCAAAAATCTGTGTCCTTCTCAAACCTCTTAGATGCCATGGACTACTCCATGCTCAGCACCATCTTATCGGAGAACAATAACAACAGCACCCTTGATCAGCAACAATACTCGCAGATCAACACCAACCAATTGAACCATTCATCGAACATGGAGAACACTAGTAACAGCAACATGATGGTGATGAGGTCAAAGCGCCAGATAGAGGAGGAAACAACAACGGTGTTGCACCCATCAAAGAAGTTCCATCACCAACTTATGGGCTCTTCTTCTTGCAGCTTCCCTAATAACATTAACAACACAAACACTGCACAATACGAGAACCCGCAATGGAACTACCTTGTCAAGCAATCCTTCTTGAACCAGCACTTACTTCTCGCTCCTCATCTTCGATTTCAAGGATAG 1068 0.4691 MGSPESNLPPGFRFHPTDEELILHYLRKKVASIPLPVSIIAEVDIYKLDPWELPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVVSPAATVTRRVGQESSVGVKKALVFYKGRPPKGVKTNWIMHEYRLVDNNRPIKLKDTSMRLDDWVLCRIYKKSKFSVSSPEESPSSEVQAAEENGLFKNTILRSPIPTPSPSPPPPLPQPLLSQKSVSFSNLLDAMDYSMLSTILSENNNNSTLDQQQYSQINTNQLNHSSNMENTSNSNMMVMRSKRQIEEETTTVLHPSKKFHHQLMGSSSCSFPNNINNTNTAQYENPQWNYLVKQSFLNQHLLLAPHLRFQG 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02804 355 Gene3D NAC domain 17 175 IPR036093 GO:0003677|GO:0006355
Arst6g02804 355 SUPERFAMILY NAC domain 5 171 IPR036093 GO:0003677|GO:0006355
Arst6g02804 355 ProSiteProfiles NAC domain profile. 8 171 IPR003441 GO:0003677|GO:0006355
Arst6g02804 355 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 290 - -
Arst6g02804 355 MobiDBLite consensus disorder prediction 205 220 - -
Arst6g02804 355 Pfam No apical meristem (NAM) protein 9 144 IPR003441 GO:0003677|GO:0006355
Arst6g02804 355 FunFam NAC transcription factor 56 17 176 - -
Arst6g02804 355 MobiDBLite consensus disorder prediction 200 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02804 Arst-Chr6 88992359 88994467 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02804 4 355 NAC Transcription Factor Family AT3G04070 48.641 1.25e-104 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst6g02804 NAM 8.9e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02804 - - ahf:112754912 652.129