Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02799 ATGGAAGAGCCTGTCGTAGTTAACAAAGGCGAGGAGCCGCTGGATTTGCCACCAGGTTTCAGATTCCACCCAACAGACGAAGAAATCATCACTTATTACCTCACCGAGAAGGTCATGAACAGCAGCTTCAGTGCAACTGCCATAGGTGAAGCCGATTTGAACAAATCCGAACCCTGGGATTTACCAAAGAAAGCAAAGATGGGAGAGAAGGAGTGGTACTTCTTTTGTCAGAAGGACAGGAAATACCCGACGGGGATGAGGACCAATAGAGCAACGGATTCCGGTTACTGGAAGGCAACCGGAAAAGACAAAGAGATTTTCAAAGGGAAAGGGAATCTCGTTGGGATGAAGAAAACGCTTGTTTTCTACCGAGGTAGAGCTCCCAAGGGTGAAAAGACCAATTGGGTCATGCATGAGTTCAGATTGGAAGGCAAATTTGCCAATTATAACCTCCCCAAGGCTGCAAAGGATGAATGGGTTGTGTCGAGGGTTTTTCACAAGAACACAGATGTAAAGAAGACTACTACCCCATCATCATCATCATCAATAATTCCTGGCCTTTTGAGGATCAACTCAATAGGCGATGATCTTCTAGATTGTTCCACACTCCCACCTCTCATGGACCCTCACCCTACTCCTCTCGATACAACAAAATCCGACGGCTATTATTTCCCCTCCTTCTCATCATCACATCAGATTCTCAATATCAAGCCCGAAGAACACAACACAAGCCACCAAATTCCCATCACCAACTACCAGATTCCAAATTTCAATACCACACTCTCTTCTTCATCATCTCATCAAATCAGACTCCAAAATCATCTCAACTTGTTCTCATCATCATCATCAAATAACAATTACCATAATAGCTCGTGGCCAAGCTATTATGATGAGGTCCACCACCATCATCAAGATGATATTCTACTAAGAGCAATCGCCTCAAAGAACTATAGCAACGGAGGAGGAGGAGGCGGCGGCGAGTGCAAGGTGGAGCAATTCTCCTCCGGCAACCAGTCAGTGGTGAGCGTTTCGCAAGACACGGGGCTGAGCAACGACAGAACCACCAATGACACGTCATCGGTGGTTTCGAAGCAGCAGCATAATAATAAAACATTGTACGAGGATCTTGAAGGTCCTTCTTCATCAGTTGCACCTCTTTCAGATTTGGAATGCTTGTGGGATACCTACTGA 1191 0.4559 MEEPVVVNKGEEPLDLPPGFRFHPTDEEIITYYLTEKVMNSSFSATAIGEADLNKSEPWDLPKKAKMGEKEWYFFCQKDRKYPTGMRTNRATDSGYWKATGKDKEIFKGKGNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKFANYNLPKAAKDEWVVSRVFHKNTDVKKTTTPSSSSSIIPGLLRINSIGDDLLDCSTLPPLMDPHPTPLDTTKSDGYYFPSFSSSHQILNIKPEEHNTSHQIPITNYQIPNFNTTLSSSSSHQIRLQNHLNLFSSSSSNNNYHNSSWPSYYDEVHHHHQDDILLRAIASKNYSNGGGGGGGECKVEQFSSGNQSVVSVSQDTGLSNDRTTNDTSSVVSKQQHNNKTLYEDLEGPSSSVAPLSDLECLWDTY 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02799 396 ProSiteProfiles NAC domain profile. 16 167 IPR003441 GO:0003677|GO:0006355
Arst6g02799 396 MobiDBLite consensus disorder prediction 339 381 - -
Arst6g02799 396 FunFam NAC domain-containing protein 100-like 25 171 - -
Arst6g02799 396 MobiDBLite consensus disorder prediction 339 376 - -
Arst6g02799 396 Gene3D NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
Arst6g02799 396 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Arst6g02799 396 SUPERFAMILY NAC domain 13 168 IPR036093 GO:0003677|GO:0006355
Arst6g02799 396 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02799 Arst-Chr6 88803056 88805033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02799 2 396 NAC Transcription Factor Family AT3G04060 49.502 3.49e-112 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst6g02799 NAM 1.8e-39 No_clan