Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02769 ATGGCAATTGCACGCACTGGAGTCTACGTGGATGACTATTTGGAGTATGCTAGCACTTTGCCCGCTGAGCTTCAGAGGCTTCTCAATACTGTGCGAGAACTTGATGAACGATCCCAATCTATGATAAACCAGACTAGGCAGCAGACAAAGGTGTGTATGGGGATCTCATCACATGGCTCTAAGAAGGGTAACCATGTCAGTGGCCATCATTATAATAACAATCATCATGCAAATGAGGAAGACGAGGCTGCGAATGAGAAATTGCGAAAGGAAATCGAGGCCAATCAGGATAATGCATTGAACCTATGTACTGAGAAAGTTTTGTTGGCACGGCAAGCATATGACTTGATAGATAGTCATGTCAAACGTCTTGATGAGGATTTAAACAACTTTGCTGAAGATCTGAAGCAAGAGGGGAAAATACCACCGGATGAACCAGCAATTCTTCCCCCATTGCCTATAGTCCCTAAACCTGAAAAACGCAAGCCCTTATATGTAACACCACAGTCAAAGAGGCTTGATTACAGGGATAGAGACTGGGATCGGGAGCATGATAGAGACTTTGAGCTAATGCCTCCACCAGGTAGCCATAAGAAGGAGTATATAACTCCTATGGAGATGGATACACCTATTGATCCAAATGAGCCAACATACTGTGTTTGTCATCAGGTGTCTTTTGGTGACATGATTGCTTGTGACAACGAAAATTGCCAAGGAGGAGAATGGTTCCACTATTCATGTGTCGGCTTAACTCAAGAGACAAGGTTCAAGGGTAAATGGTATTGTCCAACCTGCAGATTACTACCACAATGCCAATGA 819 0.4371 MAIARTGVYVDDYLEYASTLPAELQRLLNTVRELDERSQSMINQTRQQTKVCMGISSHGSKKGNHVSGHHYNNNHHANEEDEAANEKLRKEIEANQDNALNLCTEKVLLARQAYDLIDSHVKRLDEDLNNFAEDLKQEGKIPPDEPAILPPLPIVPKPEKRKPLYVTPQSKRLDYRDRDWDREHDRDFELMPPPGSHKKEYITPMEMDTPIDPNEPTYCVCHQVSFGDMIACDNENCQGGEWFHYSCVGLTQETRFKGKWYCPTCRLLPQCQ 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02769 272 SUPERFAMILY FYVE/PHD zinc finger 192 267 IPR011011 -
Arst6g02769 272 CDD ING_plant 17 128 - -
Arst6g02769 272 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 131 IPR024610 -
Arst6g02769 272 PANTHER INHIBITOR OF GROWTH PROTEIN 2 266 IPR028651 -
Arst6g02769 272 Gene3D - 5 129 - -
Arst6g02769 272 FunFam PHD finger protein ING 210 268 - -
Arst6g02769 272 Coils Coil 24 44 - -
Arst6g02769 272 SMART ING_2 9 131 IPR024610 -
Arst6g02769 272 SMART PHD_3 218 266 IPR001965 -
Arst6g02769 272 Coils Coil 78 105 - -
Arst6g02769 272 CDD PHD_ING 218 265 - -
Arst6g02769 272 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 210 267 IPR013083 -
Arst6g02769 272 ProSiteProfiles Zinc finger PHD-type profile. 216 268 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02769 Arst-Chr6 88271733 88280050 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Arst6g02769 ING 6.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02769 - - lang:109339676 490.73