Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02726 ATGAGCAAGAGTACTGCTACTACCACACCGTGCTGCAGCAAAGTTGGGATCAAGAAAGGACCATGGAGCGCCGAGGAAGACGAGATCCTCTCCAAATTTGTCCAGAAGGAAGGGGAGGGGCGGTGGCGTACGCTCCCCAAGAGGGCCGGGCTGCAGCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATGAACTACCTCCGTCCCTCCGTCAAGCGAGGCCAGATCGCTCCTGACGAGGAGGATCTCATCCTCCGCCTTCACCGTCTCTTGGGCAACAGGTGGGCTTTGATAGCTGGCAGATTACCTGGCAGGACTGATAACGAGATCAAGAATTACTGGAATACCCATCTAAGCAAGAAGCTCATAAAGCGAGGCATAGATCCAAGAACCCATAAGCCATTAATCACCACCAATTATTCTACTACTCCTGTTACTACTTCAAATGGAGGTGTTTTTCATCATCATCATCAACATTCAAATGTAATAACCTCTTCAATCATAATGCCGCTGCAGCACCAACCTACGATGACTGTGAATCCTGCGTCAGAAATTGGTAATGTCAACAACAGCAAATTTGATTATGCTCCAATAATTAGTGCTGGTGGGAACATTATGGAAGAGAATAATAATAATAATAATAATGTTGTTGTTGATTATCATCATCATGGCGGAAATAATGGGAATAATAATAATGATGTTGAGGAGGAAGATACATTGTTGGTTTTTCTGAATTCTTTATTTGATGGTGGTAACAATGAAGTGATGAATAATAACAATAACAATAATAATAATAATGATAATAGTGGAACAGACGAACTAGCGGTGTTTCAGCATCATCATGATGATGAGGGTGATGTTACAATGTTCCCTCCACCGCTTTCAACATCTTTTCGTCTTGAAGATTGGGAAGCAGAATTTAGCAATGCACTTTTAAATCAACAAGATGGTTCATCATCATCATCACCTCCTAATAAGTAA 978 0.4315 MSKSTATTTPCCSKVGIKKGPWSAEEDEILSKFVQKEGEGRWRTLPKRAGLQRCGKSCRLRWMNYLRPSVKRGQIAPDEEDLILRLHRLLGNRWALIAGRLPGRTDNEIKNYWNTHLSKKLIKRGIDPRTHKPLITTNYSTTPVTTSNGGVFHHHHQHSNVITSSIIMPLQHQPTMTVNPASEIGNVNNSKFDYAPIISAGGNIMEENNNNNNNVVVDYHHHGGNNGNNNNDVEEEDTLLVFLNSLFDGGNNEVMNNNNNNNNNNDNSGTDELAVFQHHHDDEGDVTMFPPPLSTSFRLEDWEAEFSNALLNQQDGSSSSSPPNK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02726 325 FunFam transcription repressor MYB5-like 76 142 - -
Arst6g02726 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Arst6g02726 325 SMART sant 71 119 IPR001005 -
Arst6g02726 325 SMART sant 18 68 IPR001005 -
Arst6g02726 325 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Arst6g02726 325 Pfam Myb-like DNA-binding domain 76 117 IPR001005 -
Arst6g02726 325 MobiDBLite consensus disorder prediction 251 271 - -
Arst6g02726 325 SUPERFAMILY Homeodomain-like 16 113 IPR009057 -
Arst6g02726 325 Gene3D - 76 140 - -
Arst6g02726 325 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Arst6g02726 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Arst6g02726 325 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Arst6g02726 325 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 9 255 - -
Arst6g02726 325 CDD SANT 77 117 IPR001005 -
Arst6g02726 325 Gene3D - 18 71 - -
Arst6g02726 325 CDD SANT 21 66 IPR001005 -
Arst6g02726 325 FunFam Myb transcription factor 16 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02726 Arst-Chr6 87199139 87200884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02726 5 149 MYB Transcription Factor Family AT3G13540 74.483 1.71e-79 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst6g02726 Myb_DNA-binding 7.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02726 K09422 - egr:104443016 271.166