Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02687 ATGGCGCCGAAGCAGAGAGCAGCAAGGAAGGTCGGCAGGAACCCTGAACTGGTGCGGGGGATCGGGAAGTACTCTCGGTCTCAGATGTACCACAAGAGGGGTTTGTGGGCCATAAAGGCTAAGAATGGTGGCAAGTTCCCCGTCCATGAACCCAAGCCTAAGCCCCAGGCCCTCGCTCAAAAGCCTCCTAGGCTAGCATTACTCCTGGGACAGTGCTGATTCTTCTTGCTGGAAGATTCAAGGGGAAGAGAGTTGTGTTCCTCAAGCAGCTTCCTTCTGGGCTGCTTCTTGTGTCTGGACCCTTCAAGATTAATGGAGTTCCGTTGAGACGTGTGAATCAGTCGTATGTTATTGCCACATCAACCAAAGTAGATGTGTCTGCTTGTAACGTGGAGAAATTCGATGACAAATACTTTTCAAAGGAAGTCCAGAAAAAGAAAAAGAAGGGAGAAGGCGAGTTCTTTGAGTCCGCGAAAGAGGAGAAGAAGACCCTCCCTCAAGACAAGAAGGATGACCAGAAGACTGTTGATTCTGCTTTGATAAAAGCCATAGAGAGTGTTCCAGACTTGAAGTTTTACCTTGGTGCTAGGTTTTCTTTGAAGCAAGGCCAGAAGCCTCATGAATTAGTCTTCTAG 635 0.4835 MAPKQRAARKVGRNPELVRGIGKYSRSQMYHKRGLWAIKAKNGGKFPVHEPKPKPQALAQKPPKFYPAEDVKTPLVNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVSGPFKINGVPLRRVNQSYVIATSTKVDVSACNVEKFDDKYFSKEVQKKKKKGEGEFFESAKEEKKTLPQDKKDDQKTVDSALIKAIESVPDLKFYLGARFSLKQGQKPHELVF 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02687 234 PANTHER 60S RIBOSOMAL PROTEIN L6 8 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Arst6g02687 234 Pfam Ribosomal protein L6, N-terminal domain 5 62 IPR005568 GO:0003735|GO:0005840|GO:0006412
Arst6g02687 234 Pfam Ribosomal protein L6e 127 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Arst6g02687 234 MobiDBLite consensus disorder prediction 177 197 - -
Arst6g02687 234 SUPERFAMILY Translation proteins SH3-like domain 88 178 IPR008991 -
Arst6g02687 234 ProSitePatterns Ribosomal protein L6e signature. 128 146 IPR000915 GO:0003735|GO:0005840|GO:0006412
Arst6g02687 234 FunFam 60S ribosomal protein L6 88 172 - -
Arst6g02687 234 CDD KOW_RPL6 82 234 IPR041997 -
Arst6g02687 234 Gene3D - 88 172 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02687 Arst-Chr6 86194621 86196268 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02687 1 234 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 77.778 8.79e-116 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02687 K02934 - gmx:100499766 368.237