Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02646 ATGTCTGAGCGACAAGGTGTTGGTGATCATGGCACCAATTCAGGAACACGGCGAAAAGGTGCGGCCACAAAGCGTGCCATGGCAGTGGCAGCAGCAGCAACAGTGCCTCCATGTGGGGCATGCAAGTTCTTGAGGAGGAAGTGCATCAGCGGCTGCATCTTTGCGCCCCATTTTGGCTCCGACCAAGGCGCAGCTCGCTTCGCAGCCGTGCACAAGGTGTTTGGTGCAAGCAACGTGTCGAAACTGTTGTTGCATATTCCGGTGAACCGCCGCCATGAGGCGGTGGTTACCATATCCTATGAGGCACAGGCAAGGCTGTCTGATCCGGTGTATGGTTGTGTGTCGACCATTCTTGCTTTGCAACAACAGGTGGCATCATTGCAAGGGGAGCTTTCTATGGTGCAAAATCAGCTGATAAATTCTAGGTTTGCATATGCAAATGTTCTTCATCAGTGCACACAACAGCATCATCATCATCATCATCATGATAATAATCAGCCAAACATGATCAATGTATCTTTATTACAACAACCAGCATACTCCAACAATAATTCATCTGCTTCAACCAATAATAACCTTGTGAACATGAACACCTTCAATAATAATAATAATAACCATTCAGGTTTCGAGCTTGCAATGGAGGCGGCACCATCATCACCACCACACAGCTTTGAGCCTCTTCGGTTGTCACAGGAAAATAATGACGAGGATGATGAGGAAGAGAGCATCATTATTCCACAACTATTCAACCATGAGATAGTGCTTCACCGTCAATGA 777 0.4698 MSERQGVGDHGTNSGTRRKGAATKRAMAVAAAATVPPCGACKFLRRKCISGCIFAPHFGSDQGAARFAAVHKVFGASNVSKLLLHIPVNRRHEAVVTISYEAQARLSDPVYGCVSTILALQQQVASLQGELSMVQNQLINSRFAYANVLHQCTQQHHHHHHHDNNQPNMINVSLLQQPAYSNNNSSASTNNNLVNMNTFNNNNNNHSGFELAMEAAPSSPPHSFEPLRLSQENNDEDDEEESIIIPQLFNHEIVLHRQ 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02646 258 MobiDBLite consensus disorder prediction 1 21 - -
Arst6g02646 258 Coils Coil 117 137 - -
Arst6g02646 258 ProSiteProfiles LOB domain profile. 36 138 IPR004883 -
Arst6g02646 258 MobiDBLite consensus disorder prediction 214 238 - -
Arst6g02646 258 PANTHER LOB DOMAIN CONTAINING PROTEIN 36 224 - -
Arst6g02646 258 Pfam Lateral organ boundaries (LOB) domain 37 135 IPR004883 -
Arst6g02646 258 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02646 Arst-Chr6 84663682 84664997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02646 37 242 AS2 family AT3G03760 63.636 1.03e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst6g02646 LOB 6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02646 - - ahf:112698228 427.943