Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02571 ATGGGAAGGCCTCCATGCTGTGACAAAGTTGGAATCAAGAAAGGTCCATGGACACCTGAGGAGGATATCATCCTTGTCTCTTACATCCAAGAACATGGTCCTGGAAATTGGAGATCAGTCCCTACTAATACTGGGTTGTCAAGATGCAGCAAAAGTTGTAGGCTAAGGTGGACAAATTATCTAAGGCCAGGAATCAAGAGAGGAAACTTCACTCCCCATGAAGAAGGAATGATTATTCACTTGCAAGCTCTTCTTGGTAACAAATGGGCAGCCATAGCTTCATACCTTCCACAAAGAACAGACAATGACATAAAGAATTATTGGAACACACATCTAAAGAAGAAGCTCAAGAAATTCCAACAGCAACAAACAGGTTCCATGGATTCTTCTTCTCATCAGCACCTTCAAGCGTCATCTAAGAGCTTCAGTGACAGAATTTCATCATCAGATAATAAGTCTTCTACTCAGTGTTCATCAATTACCACATCCTATGCATCAAGCACTGAGAACATTTCAAGGCTTCTAGAAGGTTGGATGAGAACTTCTCCAAAACCATCTTCATCATCTTCTCCATTCATCATCAAAGGAGGAGGAGGACCATCATCAAATCATCATGAGATTGATGAAGAAAACAATAACAACAACAATGATAATAAGGAGGTTCTTCTAGTCAAGTCTGTTTCTATGCCTGCTTTGAATCTTGAGCTTCATCATCATCAGAATCATCATCAAGACTTTGAATCTATTCTTTCCTTTGAGAATCTCAACACTACTACTGCTTCTTGCTGGGACAAATCTACTTGTGATTCTATGCCTAATAATAATAATCACAAATGTTCTTCAGAACCTGCTGCTGCTACTACTTTTTCTCATCATCATCATCATCATGAAATTGAGGAAGAAGAAGAGGACTATGAGGATCAAGAGGAGAGGAAGAATAGTAAGAGTAGTAGGGATAAGAATAATAATGACAATAATAACCCTCCATTGTCATTCCTTGAGAAGTGGCTATTGGATGAGAATGTTGGTCATGGTGAGGAGATCATGGAGTTATCTCCTATCTTCTAA 1068 0.3914 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKFQQQQTGSMDSSSHQHLQASSKSFSDRISSSDNKSSTQCSSITTSYASSTENISRLLEGWMRTSPKPSSSSSPFIIKGGGGPSSNHHEIDEENNNNNNDNKEVLLVKSVSMPALNLELHHHQNHHQDFESILSFENLNTTTASCWDKSTCDSMPNNNNHKCSSEPAAATTFSHHHHHHEIEEEEEDYEDQEERKNSKSSRDKNNNDNNNPPLSFLEKWLLDENVGHGEEIMELSPIF 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02571 355 MobiDBLite consensus disorder prediction 179 196 - -
Arst6g02571 355 FunFam Transcription factor MYB60 68 143 - -
Arst6g02571 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Arst6g02571 355 CDD SANT 16 61 IPR001005 -
Arst6g02571 355 Gene3D - 68 144 - -
Arst6g02571 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Arst6g02571 355 MobiDBLite consensus disorder prediction 118 162 - -
Arst6g02571 355 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Arst6g02571 355 SMART sant 66 114 IPR001005 -
Arst6g02571 355 SMART sant 13 63 IPR001005 -
Arst6g02571 355 MobiDBLite consensus disorder prediction 119 162 - -
Arst6g02571 355 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst6g02571 355 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Arst6g02571 355 MobiDBLite consensus disorder prediction 179 217 - -
Arst6g02571 355 Coils Coil 291 318 - -
Arst6g02571 355 CDD SANT 69 111 IPR001005 -
Arst6g02571 355 FunFam MYB-related transcription factor 13 66 - -
Arst6g02571 355 MobiDBLite consensus disorder prediction 277 331 - -
Arst6g02571 355 Gene3D - 13 66 - -
Arst6g02571 355 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Arst6g02571 355 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst6g02571 355 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02571 Arst-Chr6 82150622 82152386 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02571 1 119 MYB Transcription Factor Family AT5G62470 89.916 2.04e-80 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst6g02571 Myb_DNA-binding 1.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02571 K09422 - gmx:100802204 361.688