Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02559 ATGGCGACAAGAAAGGAAGAAGAGAGGAACGAGAAAATCATCAGAGGTCTTATGAAGCTTCCGCCCAATCGAAAATGCATCAACTGTAACAGTCTGGGCCCGCAATATGTTTGTACCAACTTTTGGACCTTCGTTTGCATGACTTGCAGTGGAATCCATCGTGAGTTTACCCATCGTGTGAAGTCTGTATCTATGGCAAAGTTCACATCACAGGAAGTTGATTCTCTTCAGAATGCGGGTAACCAGCGTGCACGGGAAATATATTTGAAAAATTGGGACTTCCAGAGGCAACGGCTGCCAGATAGCAGCAATGTCGATAAAATAAGGGAGTTTATAAGGCACGTATACGTCGATCGAAGATATGCTGCAACCAAATCTTCTGACAAGCCTCCAAGAGATATGCAGAACCCTAGAATCAATGAAGATGATACACGGCGTGCTAGTTCTTATCACTCCTATTCACAAAGCCCTCCATATGATTACCAATATGAAGATCGACGGTATGGGAAACAAGCAGCTGCATTGACCAGGAAGCCTGGTTCAGATAAAGTTCGCTATGAAGGAAAGATGAGTAGTATTATCTATAGTCCTGGACGCTTCAGTGATCATGCCTATGAGGATAGATTTGCCAATGAGGGATCTGGTCCGAGAATTTCTGACTTTTCTGTGTCCAGTGGGGGTGAGCAATTCAAATCTGAGGTTCAGTCTCCCAACTTTCATAAGGATATTGGATTTCATAGTCCACCCTATCGGCATTCAGGTCACCATTCAAGTGAAGATGTCTGGGCTTTTGCAAGGAATACATCTCTGGAAACTAATGCTAAGAGAGATATGGAAGGAATTCGGCTTCCGCAGAGGACTGCTTCACTGGGATCAATGGACAGCAACCTGTCATCTTTCAGATCTCACAATTCTGGTGGTTTAGTTGATTTTTTCTCTGAACCTGTCCAAGCTTTTGAACCGCTACAGACTAAAGTTTCTTGTGTTCCCCAACCACCTGGTCCAGCAGGTTCTACTAGCTCTGATATTTCCAACACACCTGTTGCAGCAGAACCATCCATTGATCTTTTTCAGTTGCCAGGAGCACCCTCTCAGTCTACATCAGTGGATCTGTTTCAATCAGCTGTTTTGTCTGCAGTTCCATATTCCAATGAGAGTCAACCAACACAAACTTCCCAACCTTCATCAGTTGACTTTTTTGCAGACCTTTCTCAGCAGCCATCAACTGCAACCTCAGATGAAAAGTCATTGGAGTTATCTGCCCCTAAAAATGAAGGTTGGGCAACATTTGATATGCCTCAGTACACAGCATCTACTGCAAAAGTTGAAACTCCAGCAGTACTGCCATCAGTTGCTGACACATTGCAGGACAGATTTGATCCATTCTTGAACTTGAATGGAAATATGCAATGGCCTTCATTTGAAACTTCTGGTGTTAGTGTTCCTTCTTCAGTTACATCTAATGTATGGCATGATGGTGCATGGAATGGAGAAGAACAAGTTTCTGTGACAGCAACAAGCACTCAATCTGAACAGCCTTGGAGTGCATTTGAAGATTCTGTTACCCCGGCTTCTGCAGATGGCCTTAATCAGGGATTACAACTGCAAAATCTTCCATCAACTGATGATCAATGTTTAGATTTAAGAGCTTCTGAGGGGTGCAATGAAGGTGGGATGCAAGGCATTGCCCCTATTGGCGGGTTTGATGATCATGAAATCTCATCAAATTTTAGTGGTGGCTCAGCATATCCTCCCTCTGCAATTCCCCCTATGGGAGAGAGTCAACCTAATGGAAACAGTCATAAATCAACTAATCCATTTGATTTTCTTGATGATGCTGATGTATCAGATGTAGAGCACAGTAATATGTTTCTTGATCTTAGCTCATTGCAAGCTGCTCTGCCCGATGCACAGTTACAACCTACTTTCCATAGTGGTATTGCCGAACCATGGCTTCCTCAAAATTCAGTTAACTCCTACATCTCCTCTGCTGGACAAGGTGGTGGTTTGACATTCTTGGCTGCTCAACCACCAAGTTCTCAAATATCGAATATCCAGACGCAGGAACCGGTTGCATCTTTTGGGGGAAATCCTTTTGCATAA 2103 0.4356 MATRKEEERNEKIIRGLMKLPPNRKCINCNSLGPQYVCTNFWTFVCMTCSGIHREFTHRVKSVSMAKFTSQEVDSLQNAGNQRAREIYLKNWDFQRQRLPDSSNVDKIREFIRHVYVDRRYAATKSSDKPPRDMQNPRINEDDTRRASSYHSYSQSPPYDYQYEDRRYGKQAAALTRKPGSDKVRYEGKMSSIIYSPGRFSDHAYEDRFANEGSGPRISDFSVSSGGEQFKSEVQSPNFHKDIGFHSPPYRHSGHHSSEDVWAFARNTSLETNAKRDMEGIRLPQRTASLGSMDSNLSSFRSHNSGGLVDFFSEPVQAFEPLQTKVSCVPQPPGPAGSTSSDISNTPVAAEPSIDLFQLPGAPSQSTSVDLFQSAVLSAVPYSNESQPTQTSQPSSVDFFADLSQQPSTATSDEKSLELSAPKNEGWATFDMPQYTASTAKVETPAVLPSVADTLQDRFDPFLNLNGNMQWPSFETSGVSVPSSVTSNVWHDGAWNGEEQVSVTATSTQSEQPWSAFEDSVTPASADGLNQGLQLQNLPSTDDQCLDLRASEGCNEGGMQGIAPIGGFDDHEISSNFSGGSAYPPSAIPPMGESQPNGNSHKSTNPFDFLDDADVSDVEHSNMFLDLSSLQAALPDAQLQPTFHSGIAEPWLPQNSVNSYISSAGQGGGLTFLAAQPPSSQISNIQTQEPVASFGGNPFA 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02559 700 Pfam Putative GTPase activating protein for Arf 12 123 IPR001164 GO:0005096
Arst6g02559 700 MobiDBLite consensus disorder prediction 592 606 - -
Arst6g02559 700 MobiDBLite consensus disorder prediction 122 148 - -
Arst6g02559 700 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Arst6g02559 700 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Arst6g02559 700 PRINTS HIV Rev interacting protein signature 60 81 IPR001164 GO:0005096
Arst6g02559 700 PANTHER ARFGAP/RECO-RELATED 1 700 IPR044820 GO:0005096
Arst6g02559 700 MobiDBLite consensus disorder prediction 122 161 - -
Arst6g02559 700 SUPERFAMILY ArfGap/RecO-like zinc finger 9 122 IPR037278 -
Arst6g02559 700 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 134 - -
Arst6g02559 700 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 129 IPR001164 GO:0005096
Arst6g02559 700 Gene3D Arf GTPase activating protein 1 132 IPR038508 -
Arst6g02559 700 CDD ArfGap_AGFG 11 123 - -
Arst6g02559 700 SMART arf_gap_3 11 129 IPR001164 GO:0005096
Arst6g02559 700 MobiDBLite consensus disorder prediction 587 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02559 Arst-Chr6 81913311 81920278 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02559 14 116 C2H2 Transcription Factor Family AT4G05330 34.211 1.04e-11 65.1