Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02489 ATGTATCACGCGAAGAAGTTCTCGTCTGCAACGATGGTGCCGCATAAACCTCAAGGTGGTGGCGAACAAGTTGGAAATGTTGGGGTTTTGGATGGATCTGCGGTGAGGAATGCGGGACCTGCTAGTTCTGGTGGAAATGGGAAGCAGCGTTTGCGATGGACATCTGAACTTCATGATCGTTTTGTGGATGCCATTACGCAACTTGGTGGACCAGATAGAGCAACACCAAAAGGTGTTCTGCGAGTGATGGGTGTACCTGGACTTACTATTTATCATGTTAAAAGCCATTTACAGAAATATCGTCTAGCAAAGTACTTGCCTGATTCTCCAGCTGATGACTCTAAAGATGAAAAAAGGACATCTGGAGACACTGTTACTGGCATAGATTCTTCTCAGGGGTTGCAAATCAATGATGCTCTAAGAATGCAGATGGAGGTTCAGAAACGTCTTCATGAACAGCTTGAGGTGCAAAAGCAGTTACAAATGAGAATCGAAGCGCAGGGGAAATACTTGCAGAAGATCATAGAGGAACAGCAGAAATTAGGGAGTACCTTGACAAATTCAGACACATTGCCATTGTCCCACGATAAGCAAAATAATCCCCCGTCAGAGCCTTCTGGATCAAGCGATGCCATCGCAGATTCCATGTCTCCACTCAAAAAACAGAGAATCGATGATGGTTCAAAGGATGGCTTTGCTGCTTCTCAGGTGACAACAAAGACTTCACAAAAGACTGATTGTAGTGTTGATCAGTTGGACTCATGA 765 0.4471 MYHAKKFSSATMVPHKPQGGGEQVGNVGVLDGSAVRNAGPASSGGNGKQRLRWTSELHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPDSPADDSKDEKRTSGDTVTGIDSSQGLQINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGSTLTNSDTLPLSHDKQNNPPSEPSGSSDAIADSMSPLKKQRIDDGSKDGFAASQVTTKTSQKTDCSVDQLDS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02489 254 Pfam Myb-like DNA-binding domain 51 101 IPR001005 -
Arst6g02489 254 Coils Coil 137 157 - -
Arst6g02489 254 MobiDBLite consensus disorder prediction 1 20 - -
Arst6g02489 254 MobiDBLite consensus disorder prediction 107 132 - -
Arst6g02489 254 NCBIfam myb-like DNA-binding domain, SHAQKYF class 48 103 IPR006447 GO:0003677
Arst6g02489 254 Pfam MYB-CC type transfactor, LHEQLE motif 134 180 IPR025756 -
Arst6g02489 254 MobiDBLite consensus disorder prediction 107 123 - -
Arst6g02489 254 SUPERFAMILY Homeodomain-like 48 102 IPR009057 -
Arst6g02489 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 105 IPR017930 -
Arst6g02489 254 MobiDBLite consensus disorder prediction 185 215 - -
Arst6g02489 254 Gene3D - 47 106 - -
Arst6g02489 254 MobiDBLite consensus disorder prediction 232 254 - -
Arst6g02489 254 FunFam Myb family transcription factor 47 105 - -
Arst6g02489 254 MobiDBLite consensus disorder prediction 185 254 - -
Arst6g02489 254 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 47 247 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02489 Arst-Chr6 80005819 80009731 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02489 42 178 G2-like Transcription Factor Family AT4G28610 59.124 1.64e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst6g02489 Myb_DNA-binding 6.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02489 - - adu:107494193 493.812