Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02488 ATGTATCACGCGAAGAAGTTCTCGTCTGCAACGATGGTGCCGCATAAACCTCAAGGTGGTGGCGAACAAGTTGGAAATGTTGGGGTTTTGGATGGATCTGCGGTGAGGAATGCGGGACCTGCTAGTTCTGGTGGAAATGGGAAGCAGCGTTTGCGATGGACATCTGAACTTCATGATCGTTTTGTGGATGCCATTACGCAACTTGGTGGACCAGATAGAGCAACACCAAAAGGTGTTCTGCGAGTGATGGGTGTACCTGGACTTACTATTTATCATGTTAAAAGCCATTTACAGAAATATCGTCTAGCAAAGTACTTGCCTGATTCTCCAGCTGATGGTAAAGACTCTAAAGATGAAAAAAGGACATCTGGAGACACTGTTACTGGCATAGATTCTTCTCAGGGGTTGCAAATCAATGATGCTCTAAGAATGCAGATGGAGGTTCAGAAACGTCTTCATGAACAGCTTGAGGTGCAAAAGCAGTTACAAATGAGAATCGAAGCGCAGGGGAAATACTTGCAGAAGATCATAGAGGAACAGCAGAAATTAGGGAGTACCTTGACAAATTCAGACACATTGCCATTGTCCCACGATAAGCAAAATAATCCCCCGTCAGAGCCTTCTGGATCAAGCGATGCCATCGCAGATTCCATGTCTCCACTCAAAAAACAGAGAATCGATGATGGTTCAAAGGATGGCTTTGCTGCTTCTCAGGTGACAACAAAGACTTCACAAAAGACTGATTGTAGTGTTGATCAGTTGGACTCATGA 771 0.4462 MYHAKKFSSATMVPHKPQGGGEQVGNVGVLDGSAVRNAGPASSGGNGKQRLRWTSELHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPDSPADGKDSKDEKRTSGDTVTGIDSSQGLQINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGSTLTNSDTLPLSHDKQNNPPSEPSGSSDAIADSMSPLKKQRIDDGSKDGFAASQVTTKTSQKTDCSVDQLDS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02488 256 MobiDBLite consensus disorder prediction 1 20 - -
Arst6g02488 256 SUPERFAMILY Homeodomain-like 48 102 IPR009057 -
Arst6g02488 256 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 47 249 IPR044848 GO:0003700
Arst6g02488 256 MobiDBLite consensus disorder prediction 187 217 - -
Arst6g02488 256 NCBIfam myb-like DNA-binding domain, SHAQKYF class 48 103 IPR006447 GO:0003677
Arst6g02488 256 MobiDBLite consensus disorder prediction 234 256 - -
Arst6g02488 256 MobiDBLite consensus disorder prediction 187 256 - -
Arst6g02488 256 Pfam Myb-like DNA-binding domain 51 101 IPR001005 -
Arst6g02488 256 MobiDBLite consensus disorder prediction 107 134 - -
Arst6g02488 256 Coils Coil 139 159 - -
Arst6g02488 256 MobiDBLite consensus disorder prediction 108 125 - -
Arst6g02488 256 FunFam Myb family transcription factor 47 105 - -
Arst6g02488 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 105 IPR017930 -
Arst6g02488 256 Gene3D - 47 106 - -
Arst6g02488 256 Pfam MYB-CC type transfactor, LHEQLE motif 136 182 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02488 Arst-Chr6 80005819 80009731 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02488 42 180 G2-like Transcription Factor Family AT4G28610 58.993 9.90e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst6g02488 Myb_DNA-binding 6.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02488 - - adu:107494193 503.056