Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02481 ATGAGAGAGAGAGAGAGTGTGGGTGAGAAATACAGTGGGGGTAGTTTTAGGAACCCGATCAAAGATCCTAGAATTTGGAATCGAGAAAAGTATCGCCGATTGGAGACGGAGTCCTTTTCGATTTTCTTAGATAACCTTCCAGAGGACATCTCAAAGAGAGAACTGTTTGAGCTCTTCAGTTGGACTGGATGTATAAACGACATATACCTTTTTCGAAAGCAAAAAAATGGTGGTTTGTACATCTTTGCATTCATACGATACACTACGAAGGGAGAGGCTATAAAGGCCATAACAGAGATGAATCGTATGAGACTGAGGGGTAAGGTTGTGTTTGTTGGGGAAGCAAAATATAGGAGAATGTCGGCTGCTAATGGCACAAAGAAGATACAGGAAGGAGGGATTGTTTGA 408 0.4191 MRERESVGEKYSGGSFRNPIKDPRIWNREKYRRLETESFSIFLDNLPEDISKRELFELFSWTGCINDIYLFRKQKNGGLYIFAFIRYTTKGEAIKAITEMNRMRLRGKVVFVGEAKYRRMSAANGTKKIQEGGIV 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02481 135 CDD RRM_SF 41 112 - -
Arst6g02481 135 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 109 IPR000504 GO:0003723
Arst6g02481 135 Gene3D - 21 133 IPR012677 -
Arst6g02481 135 SUPERFAMILY RNA-binding domain, RBD 32 119 IPR035979 GO:0003676
Arst6g02481 135 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 117 IPR000504 GO:0003723
Arst6g02481 135 SMART rrm1_1 40 113 IPR000504 GO:0003723
Arst6g02481 135 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 37 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02481 Arst-Chr6 79791709 79792116 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02481 40 118 Eukaryotic Initiation Factors Gene Family AT1G22760 29.114 5.69e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02481 K13126 - adu:107468962 178.333