Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02460 ATGGAACACAATCTAGGTCAAGGCAATGTTCCTCCACCTGGGTCTATTGATAAGTCTAGGGTTTTGAATGTTAAGCCACTGAGAACTCTTGTTCCTGTGTTTCCTTCGCCATCAAATCCCTCTTCCTCTTCAAATCCACAAGGTGGAGCACCCTTTGTTTGCGTTTCTCCTTCTGGTCCTTTCCCCTCTGGCGTTGCGCCGTTTTACCCGTTCTTCATCTCCCCGGAGTCGCAGAGGCTATCTGAACAGAATGCACAAACCGCACAAACCCCGGCTCCTCAACGTGTGGGCCCAATATCGGCCGCAGTTCCAATTAATTCATTTAGGACGCCAAATGGAGATGTGGGTTCATCACGAAAAAATAGCAGAACTCGTGGACAGTTAACAGATGAAGATGCCTATGCTGAGGTGCAGGACGTTGATGCTGAAGATGGAACGGGGGAAGGGAGGCGCACTAAACAGAAGAAACCAAGGGGACGGCGTCCTGGAGGTACTGCAGTGGTTGATCTGGATCAAGTGGCTAATGATATTCTCAATTCAATTAATCCTATTGTCTTTGATGTTCTAAAACAACCTGATGGTAGTAGGGATGCAGTTACATATACACTTATGATATATGAAGTTATGCGAAGAAAGCTTGGACAAGTTGAAGAGACATCAAGGGATATTGCTGGAGCAAAGCGGCCTGATCTGAAGGCTGGCAACATTATGATGACCAAGGGGATTAGGGCAAATAGCAAGAAACGTATTGGAGGTGTGCCTGGTGTTGAAATTGGGGATATCTTCTTTTTCAGATTTGAATTGTGCCTCGTTGGATTACACTCTCCATCTATGGCTGGAATTGATTACATTGGTTCCAAAACCAGTCAAGAGGAAGAACCACTAGCTGTCAGTATTGTCTCTTCTGGAGGATATGAAGATAATGCAGAGGATGGTGATGTGTTGATTTACAGTGGCCAAGGTGGGGCTAATCGGGAGAAAGGAGCAAGTGACCAAAAGCTTGAAAGGGGTAATCTTGCACTGGAAAAGAGCTTGCATAGAGGTAATGATGTGAGAGTAATTAAGGGTTTGAGAGATGAAGCACATCCAACTGGTAAGGTATATGTCTATGATGGCCTTTACAAGATCCAGGATTCGTGGGTAGAGAAAGCAAAATCTGGTTTCAATGTATTCAAATATAAATTAGCTAGGTTGCCCGGGCAGCCTGCAGCATATATGATATGGAAATCCATTCAACAGTGGACTGATAAAACTGTAACAAGAACTGGAGTTATATTGCCTGATCTTACTTCCGGGGCAGAAAATCTACCTGTTTGTCTTGTGAATGATGTTGATAATGAGAAAGGCCCTGCATATTTTACTTACTCCCCATCTGTCAAGAATTTGAAGCCAACTGCCCCTTTGGAATCTTCTGGTGGATGTTCTTGTACTGGTGGATGCCAAGCTATCAACCATAACTGTCCTTGTATTCAAAAGAACGGAGGTTATCTCCAATATTCTGCAAATGGGATGCTTGCTGATCTGAAGTCTGTGATATATGAGTGTGGTCCTTCCTGTCAGTGCCCTCCTAATTGCCGGAACAGGATTTCCCAAGGTGGCTTGAAATTTCGTTTGGAGGTGTTCAAAACTAAGGATAAAGGGTGGGGTCTAAGGTCTTGGGATCCTATTCGTGCAGGAACTTTCATATGCGAGTATGCTGGGGAAGTCATAGATAATGCTAAAGTTGATGAGTTTAGCAGTGAAAATGAAGATGATTACATTTTCGATTCTACTCGTATTTATCCGCAACTGGAAATTTTCCCAGCTGATACTGAAGCTCCAAAGATCCCTTCCCCTCTCTATATATCAGCAAAAAATGAAGGGAATGTGGCTCGGTTTATGAATCACAGCTGCTCCCCAAATGTATTGTGGCGTCCAGTTATACGGGAAAATAAGAATGAATCTGATCTCCACATTGCTTTCTATGCAATTAGACATATTCCTCCTATGATGGAGTTAACTTATGACTATGGAACAGTTCTTCCTCTCAAAGGAGGCCAGAAGAAAAAGAAATGCTTTTGTGGGTCTGCAAAATGCAGGGGTTACTTTTGTTAG 2094 0.4346 MEHNLGQGNVPPPGSIDKSRVLNVKPLRTLVPVFPSPSNPSSSSNPQGGAPFVCVSPSGPFPSGVAPFYPFFISPESQRLSEQNAQTAQTPAPQRVGPISAAVPINSFRTPNGDVGSSRKNSRTRGQLTDEDAYAEVQDVDAEDGTGEGRRTKQKKPRGRRPGGTAVVDLDQVANDILNSINPIVFDVLKQPDGSRDAVTYTLMIYEVMRRKLGQVEETSRDIAGAKRPDLKAGNIMMTKGIRANSKKRIGGVPGVEIGDIFFFRFELCLVGLHSPSMAGIDYIGSKTSQEEEPLAVSIVSSGGYEDNAEDGDVLIYSGQGGANREKGASDQKLERGNLALEKSLHRGNDVRVIKGLRDEAHPTGKVYVYDGLYKIQDSWVEKAKSGFNVFKYKLARLPGQPAAYMIWKSIQQWTDKTVTRTGVILPDLTSGAENLPVCLVNDVDNEKGPAYFTYSPSVKNLKPTAPLESSGGCSCTGGCQAINHNCPCIQKNGGYLQYSANGMLADLKSVIYECGPSCQCPPNCRNRISQGGLKFRLEVFKTKDKGWGLRSWDPIRAGTFICEYAGEVIDNAKVDEFSSENEDDYIFDSTRIYPQLEIFPADTEAPKIPSPLYISAKNEGNVARFMNHSCSPNVLWRPVIRENKNESDLHIAFYAIRHIPPMMELTYDYGTVLPLKGGQKKKKCFCGSAKCRGYFC 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02460 697 ProSiteProfiles YDG domain profile. 251 397 IPR003105 -
Arst6g02460 697 ProSiteProfiles Pre-SET domain profile. 472 533 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Arst6g02460 697 MobiDBLite consensus disorder prediction 34 51 - -
Arst6g02460 697 ProSiteProfiles Post-SET domain profile. 681 697 IPR003616 -
Arst6g02460 697 MobiDBLite consensus disorder prediction 105 123 - -
Arst6g02460 697 SMART G9a_1 246 401 IPR003105 -
Arst6g02460 697 MobiDBLite consensus disorder prediction 79 165 - -
Arst6g02460 697 Pfam Pre-SET motif 430 528 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Arst6g02460 697 Gene3D SET domain 419 696 IPR046341 -
Arst6g02460 697 SUPERFAMILY SET domain 412 677 IPR046341 -
Arst6g02460 697 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 234 416 - -
Arst6g02460 697 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 100 696 IPR025794 GO:0016571
Arst6g02460 697 ProSiteProfiles SET domain profile. 536 671 IPR001214 GO:0005515
Arst6g02460 697 MobiDBLite consensus disorder prediction 79 94 - -
Arst6g02460 697 SMART set_7 536 677 IPR001214 GO:0005515
Arst6g02460 697 SUPERFAMILY PUA domain-like 233 416 IPR015947 -
Arst6g02460 697 Pfam SET domain 547 671 IPR001214 GO:0005515
Arst6g02460 697 Pfam SAD/SRA domain 250 401 IPR003105 -
Arst6g02460 697 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 119 690 - -
Arst6g02460 697 Gene3D - 233 418 IPR036987 -
Arst6g02460 697 SMART preset_2 426 520 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Arst6g02460 697 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02460 Arst-Chr6 79456409 79461306 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02460 6 696 Su(var)3-9 homologs AT1G73100 49.579 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst6g02460 SAD_SRA 3.8e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02460 K24405 - gmx:100805932 1131.7