Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02421 ATGGCAGAAAGATTATCTCTTGGCAATGTTGAGGACAGAAAGCTCAAAAGCAAGATGGAGGATTCTCCCACCCAAGACCGTCTAGAGTCAGAGAATGCAACATTGTCTTTGATGATGATGAAGGATTCACCTACCATGAACGGTCTAGATCCAGAGAATCTAACATTGTCTTTGACGACTAAGATGAAGGATTCACCTATCATGAACAGTTTACAGCCAGAGAATCTAACACTGTCTTTGGCAACTAAGATGGAAGATTCACCCACCATGGACGGTCTAGGGTCAGACAATCTAATGTTGTCTTTGACTCTAGCTACCAGAACCATAGTAGATGAATCTCATTCTAAAGCCACGTCAACTTCTAATAAACCCTCGAAAGATCCAGAGGGTTCAGGATCAAATACTCTCCAAAATCATATAGATACCTCTGATGACAAGGAAGATTCACCTTTCCCTTGTGGATTTTGCAATAGAAGGTTCAGTAGTTCCCAAGCCCTAGGGGGACACCAAAACGCACACAGGAGAGAGCGTTCTCCCTTAAACAAAAGAAAGAAAACAAACGAACCAGAAGACATGGACGAAGCAGATCTATTTGCCAACCGTGCTCTTGGTAGTTTTCTTAGTTCAAACTATTCTTCATTCTCCACCACCGTACCAAGCCTTCGATTCCAAGGCTTATCACCACCCTCGTCAACCCTATCTCCCCACCCATACCATCATGGTGGCAGCACCATGACCAGGAGTCACATGACTAGTCACGTGTCATCCTTAACATCTTGGCCGCGCCCTGGTTCAATAGGTAGTCGGGCTTTTGGAGGCTATGGCCCTTCGTATGGGACGCAACCTTTCCCCAAAGCATCGTCCCTATTGTCGCCGCAACATCGCAATGCTGGGGGAAATAATAATAATAACGACCACCACCACGACCAAGATGGAAATCCCAGTGTGTCACCAAATGATTCAGCATCGGAAGACCTAGACTTAACGCTGGGTCTTTGA 999 0.4555 MAERLSLGNVEDRKLKSKMEDSPTQDRLESENATLSLMMMKDSPTMNGLDPENLTLSLTTKMKDSPIMNSLQPENLTLSLATKMEDSPTMDGLGSDNLMLSLTLATRTIVDESHSKATSTSNKPSKDPEGSGSNTLQNHIDTSDDKEDSPFPCGFCNRRFSSSQALGGHQNAHRRERSPLNKRKKTNEPEDMDEADLFANRALGSFLSSNYSSFSTTVPSLRFQGLSPPSSTLSPHPYHHGGSTMTRSHMTSHVSSLTSWPRPGSIGSRAFGGYGPSYGTQPFPKASSLLSPQHRNAGGNNNNNDHHHDQDGNPSVSPNDSASEDLDLTLGL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02421 332 MobiDBLite consensus disorder prediction 271 332 - -
Arst6g02421 332 MobiDBLite consensus disorder prediction 170 191 - -
Arst6g02421 332 MobiDBLite consensus disorder prediction 1 27 - -
Arst6g02421 332 MobiDBLite consensus disorder prediction 1 29 - -
Arst6g02421 332 MobiDBLite consensus disorder prediction 226 248 - -
Arst6g02421 332 Gene3D Classic Zinc Finger 130 201 - -
Arst6g02421 332 MobiDBLite consensus disorder prediction 281 300 - -
Arst6g02421 332 MobiDBLite consensus disorder prediction 163 191 - -
Arst6g02421 332 ProSiteProfiles Zinc finger C2H2 type domain profile. 151 178 IPR013087 -
Arst6g02421 332 MobiDBLite consensus disorder prediction 112 139 - -
Arst6g02421 332 MobiDBLite consensus disorder prediction 112 148 - -
Arst6g02421 332 SUPERFAMILY beta-beta-alpha zinc fingers 148 178 IPR036236 -
Arst6g02421 332 ProSitePatterns Zinc finger C2H2 type domain signature. 153 173 IPR013087 -
Arst6g02421 332 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 119 331 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02421 Arst-Chr6 77119158 77120319 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02421 136 190 C2H2 Transcription Factor Family AT5G01860 49.123 3.54e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst6g02421 None None None