Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02412 ATGGCAGTGTCTCCTCCTCTTCCAAGCCAGTCTTTGGAAGCTGAATTTGAAGCTCAGAACTCTGAATCTCCACTCTTGCAAATTGGAAATGATGGCCTCACTAAACGTGTTATTAGGAAAGGTCTCACTTGGCAAACTCCATTCTTTGGAGACGAGGTTGAAGTTAATTTCAGAGGACAAGTTGAAAATGGAGCATCTCTTGAATCCAGTTATGATAAAGGGTCCACGTTTCGTTTCAAATTAGGCCAATGTGAAGTTATCAAGGGCTGGGATGAGGGAGTTGGGAGCATGAAGAAAGGGGAGAGAGCAATCTTCAAAATGCCACCTAACTTGGCGTATGGGGAAGTAGGGTCTCCACCACTGGTTCCTCCCAACGCGACTCTCATTTTCGAAATCGAATTGCTATCTTGGAATACCATTAAAGACTTGAATGGTGATGGAGGAATCATCAAAAAGATTCTAAAAGAGGGAGATGGATGGGCTACCCCTAAAGACGCTGATGAAGTTCTAGTGAAATATGAAGCAATGCTAGAGAGTGGCATGCTTGTCTCTAACTCTGACCAAGGTGTGGAATTTAATGTAAGTGAAGGCTATCTATGTCCTGCCATGAGTGTAGCAGTTAAGACCATGAGAAAGGGTGAGGTGGCAGAGCTAGCTTTGAAATTCTCTTATGGAATCCTTCAAAATTCAGATAGAATCAAGGAGCCTGATGGTTTTCTCCGACCGGATTTCAAGATAACAACAATCAAACTAGAGTTAGTATCCTGGAAAATTGTGACCGATGTCACAGGCAATAAGAAAATATTGAAGAAAATTAAGAAATCTGGTGAGGGGTTCGATCGTCCCAACGAAGGATCTCATGTGAAAGTTATATATTCATGTAAACAAAAAGATGGAACAATTATTCAGAAGAAAGGATCAGAGGAAGAACCTTTTGAGTTCACAATTCAAGAAGGACAGGTGCCTGAGGGTCTAGAAAGAGCAATAATGACAATGAAAAAAGCAGAACAAGCTCTTGTGACTATCAGTGCTGATTATTTTAGTGACAACAATTCACAGGGAGAAGGAGAAGATACACCTAACAATAACAATAATAGTAATAATAAAGCCCTTTACTATGAAGTTGAATTGGTTGATTTCGTTAAGGAGAAACCATTTTGGAAGATGGACAACCAAGAGAAATTAGAAGCTTGTGAGAAGAAGAAGCATGATGGGAATTTGATGTTTAAGGCTGAAAATTTCAAGCGTGCATCCATGGAATATGAAAAGGCTGTAAAATGCATAGAGTTTGATCATTCATTCAGTGAAGATGAGAAGAGTCATGCAAATACGTTACGGTTATCATGTAACTTGAATAATGCTGCTTGTAAACTCAAATTGGGGGACTACACTGAAGCTTCCAGATTATGCACAAAGGTACTAGAGAAAGATCCTTTAAATGTGAAGGCTCTATACAGAAGATGCCAAGCATACCTAAAAACATCAGATTTGGAGAAAGCTGAGGTTGATATTAAAAGAGCACTCATTATTGATCCAAATAACAGAGACATTAAAGTTGAGTACAAAGAGCTGAAACTCAAGCAGAAGGAATACAACAAATATGAATCCAACATCTTCGGCACAATGTTTTCAAGGATGAGCTAG 1644 0.3936 MAVSPPLPSQSLEAEFEAQNSESPLLQIGNDGLTKRVIRKGLTWQTPFFGDEVEVNFRGQVENGASLESSYDKGSTFRFKLGQCEVIKGWDEGVGSMKKGERAIFKMPPNLAYGEVGSPPLVPPNATLIFEIELLSWNTIKDLNGDGGIIKKILKEGDGWATPKDADEVLVKYEAMLESGMLVSNSDQGVEFNVSEGYLCPAMSVAVKTMRKGEVAELALKFSYGILQNSDRIKEPDGFLRPDFKITTIKLELVSWKIVTDVTGNKKILKKIKKSGEGFDRPNEGSHVKVIYSCKQKDGTIIQKKGSEEEPFEFTIQEGQVPEGLERAIMTMKKAEQALVTISADYFSDNNSQGEGEDTPNNNNNSNNKALYYEVELVDFVKEKPFWKMDNQEKLEACEKKKHDGNLMFKAENFKRASMEYEKAVKCIEFDHSFSEDEKSHANTLRLSCNLNNAACKLKLGDYTEASRLCTKVLEKDPLNVKALYRRCQAYLKTSDLEKAEVDIKRALIIDPNNRDIKVEYKELKLKQKEYNKYESNIFGTMFSRMS 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02412 547 FunFam Peptidylprolyl isomerase 386 541 - -
Arst6g02412 547 ProSiteProfiles TPR repeat profile. 481 514 IPR019734 GO:0005515
Arst6g02412 547 Gene3D - 8 141 IPR046357 GO:0003755
Arst6g02412 547 SUPERFAMILY FKBP-like 256 401 - -
Arst6g02412 547 Gene3D - 142 257 IPR046357 GO:0003755
Arst6g02412 547 Pfam Tetratricopeptide repeat 458 513 - -
Arst6g02412 547 Gene3D Tetratricopeptide repeat domain 384 540 IPR011990 GO:0005515
Arst6g02412 547 SUPERFAMILY TPR-like 392 543 IPR011990 GO:0005515
Arst6g02412 547 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 50 138 IPR001179 GO:0003755
Arst6g02412 547 Gene3D - 258 383 IPR046357 GO:0003755
Arst6g02412 547 SUPERFAMILY FKBP-like 143 225 - -
Arst6g02412 547 SUPERFAMILY FKBP-like 25 139 - -
Arst6g02412 547 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 285 381 IPR001179 GO:0003755
Arst6g02412 547 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 166 257 IPR001179 GO:0003755
Arst6g02412 547 PANTHER PEPTIDYLPROLYL ISOMERASE 27 142 - -
Arst6g02412 547 SMART tpr_5 481 514 IPR019734 GO:0005515
Arst6g02412 547 SMART tpr_5 447 480 IPR019734 GO:0005515
Arst6g02412 547 FunFam Peptidyl-prolyl cis-trans isomerase 27 139 - -
Arst6g02412 547 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 162 225 IPR001179 GO:0003755
Arst6g02412 547 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 281 378 IPR001179 GO:0003755
Arst6g02412 547 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 50 135 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02412 Arst-Chr6 76501899 76520806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02412 26 546 Calmodulin-binding Proteins AT5G48570 53.143 0.0 545
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02412 6 76501899 76520806 Arst6g02412 6 76501899 76520806 ECH