Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02325 ATGGAAAACATGCCACCAGGTTATCGTTTCTACCCTACGGAAGAGGAGCTGATTTCATTCTATCTACGGAACAAGCTTGAAGGAGTGAGGGAGGACATGAATCGGGTTATTCCAGTTCTTGATATATATGAATATAGTCCAAGCGAACTCCCACAAATATCGGGAGAGGCGAGTGTTAGAGACAGCGAGCAGTGGTTCTTTTTCATTCCGCGGCAAGAAAGCGAAGCGCGTGGAGGGAGGCCGAAGAGGCTCACAACAACTGGGTACTGGAAAGCCACTGAATTCAGTTTATGCCGAGTGTACAAGAAAGCAAAATGTTTGAGGGCATTTGATAGAAGACCACCTCCAAGGAGGGACACGTATCCTCCTAGCCAGAACAACGGTTCATCATCTTTTGATCATCATCATCAACATAATCAAACGGTGGAGAAATCTTCAGGTGCAGGTAGCTCACCGGAGAGTTCGTGCTCCGAAGACCACGGACAGTGTTCTCATCGGACGGAGGATGTGGAAAACGCTAACGAGCCATTTCTCGATTGGGAGCAAATCGATTGGTTCTTAGGATCTTCACTGCCGGAACCATGA 585 0.4769 MENMPPGYRFYPTEEELISFYLRNKLEGVREDMNRVIPVLDIYEYSPSELPQISGEASVRDSEQWFFFIPRQESEARGGRPKRLTTTGYWKATEFSLCRVYKKAKCLRAFDRRPPPRRDTYPPSQNNGSSSFDHHHQHNQTVEKSSGAGSSPESSCSEDHGQCSHRTEDVENANEPFLDWEQIDWFLGSSLPEP 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02325 194 SUPERFAMILY NAC domain 2 94 IPR036093 GO:0003677|GO:0006355
Arst6g02325 194 MobiDBLite consensus disorder prediction 142 158 - -
Arst6g02325 194 Gene3D NAC domain 13 96 IPR036093 GO:0003677|GO:0006355
Arst6g02325 194 ProSiteProfiles NAC domain profile. 4 168 IPR003441 GO:0003677|GO:0006355
Arst6g02325 194 Pfam No apical meristem (NAM) protein 5 94 IPR003441 GO:0003677|GO:0006355
Arst6g02325 194 MobiDBLite consensus disorder prediction 159 173 - -
Arst6g02325 194 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 94 - -
Arst6g02325 194 MobiDBLite consensus disorder prediction 111 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02325 Arst-Chr6 70392795 70394103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02325 7 185 NAC Transcription Factor Family AT5G22380 40.088 2.84e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst6g02325 NAM 3.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02325 - - adu:107494022 389.037