Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02297 ATGATAGTGATATTGCTGGAAGCCACGGGAACAAGAGATGAGGGAATAGTTGTTAAAGACCTCAGTTCTAAATGGGAGTCTAGTGATCAAAGTGGAAAGTGGCTAAAATTGAAGCCTGAGTACATTCAAGCTAGCGCTGATCTGGATGTGCTTATCATAGGAGGTTATTATGGCTCTGGACGATGTGGAGGGGAGGTTGCTCAGTTCTTGGTGGGCCTTGCTGAGCGTCCATCCCCAAATACACATCCCAAGCGGTTTATCTCCTTCTGTAGAGTTGGTACTGGGCTTTCTGATGATGAGCTTGATTCGTTAGTAACAACACTAAAACCTTACTTCCGATTGAATCCGCACTTCCAACCTTGGCAAGACCGATTAGGTCTTTAG 384 0.4531 MIVILLEATGTRDEGIVVKDLSSKWESSDQSGKWLKLKPEYIQASADLDVLIIGGYYGSGRCGGEVAQFLVGLAERPSPNTHPKRFISFCRVGTGLSDDELDSLVTTLKPYFRLNPHFQPWQDRLGL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02297 127 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 8 43 - -
Arst6g02297 127 Gene3D DNA ligase/mRNA capping enzyme 1 40 - -
Arst6g02297 127 PANTHER DNA LIGASE 4 6 116 IPR029710 GO:0003677|GO:0003910|GO:0005524|GO:0006281|GO:0051103
Arst6g02297 127 SUPERFAMILY Nucleic acid-binding proteins 47 121 IPR012340 -
Arst6g02297 127 ProSiteProfiles ATP-dependent DNA ligase family profile. 1 75 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Arst6g02297 127 Gene3D - 41 125 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02297 Arst-Chr6 68289219 68293251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02297 14 122 Core DNA Replication Machinery Family AT1G08130 31.746 4.25e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02297 K10777 - adu:110272655 231.491