Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g02296 ATGATAGTGATATTGCTGGAAGCCACGGGAACAAGAGATGAGGGAATAGTTGTTAAAGACCTCAGTTCTAAATGGGAGTCTAGTGATCAAAGTGGAAAGTGGCTAAAATTGAAGCCTGAGTACATTCAAGCTAGCGCTGATCTGGATGTGCTTATCATAGGAGGTTATTATGGCTCTGGACGATGTGGAGGGGAGGTTGCTCAGTTCTTGGTGGGCCTTGCTGAGCGTCCATCCCCAAATACACATCCCAAGCGGTTTATCTCCTTCTGTAGAGTTGGTACTGGGCTTTCTGATGATGAGCTTGATTCGACATGTTGCTTGGTCATTGAACTTCTTATGCACTTTGCCAGATTGAATCCGCACTTCCAACCTTGGCAAGACCGATTAGGTCTTTAG 396 0.4571 MIVILLEATGTRDEGIVVKDLSSKWESSDQSGKWLKLKPEYIQASADLDVLIIGGYYGSGRCGGEVAQFLVGLAERPSPNTHPKRFISFCRVGTGLSDDELDSTCCLVIELLMHFARLNPHFQPWQDRLGL 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g02296 131 Gene3D - 41 128 IPR012340 -
Arst6g02296 131 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 8 43 - -
Arst6g02296 131 SUPERFAMILY Nucleic acid-binding proteins 47 105 IPR012340 -
Arst6g02296 131 PANTHER DNA LIGASE 4 6 103 IPR029710 GO:0003677|GO:0003910|GO:0005524|GO:0006281|GO:0051103
Arst6g02296 131 Gene3D DNA ligase/mRNA capping enzyme 1 40 - -
Arst6g02296 131 ProSiteProfiles ATP-dependent DNA ligase family profile. 1 75 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g02296 Arst-Chr6 68289219 68293251 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g02296 14 126 Core DNA Replication Machinery Family AT1G08130 31.746 2.04e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g02296 K10777 - adu:110272655 263.077